Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g01893 ATGGATCAAAATTCCAATGAAATTCTCCGTGAGTTCCCAAACCTCTTCCGTCAATACAAAGACGGCCGCGTCGAACGCTTTCTCGGCTCCGAAATCACCCCGCCGGGCACCGACAAATTAACCGGTGTTCAATCCAAAGACATTACCATCAACGCCGACACCGGAATCGGAGCTCGTCTCTTTCTCCCACCAAACGCCACTCCTTCTAAAAAACTCCCTCTCTTAATCTACATCCACGGCGGCGCTTTCTGCATTTGCACTCCTTTCAACCCTGGCTACCACCGTCATGCTAACAACGTTGCTGCAGCAGCAAACGTTGTAGTTTTCTCCATTCATTATAGGTTAGCACCTGAACACCCTCTTCCTATTGCTTATGATGATACATGGGAAGCAATTCAATGGGTATCAAAAAGTTCTGATCCATGGCTTAAAGACCACGCCGATTACAACGTTGTTTTCTTCGCCGGAGACAGTGCCGGAGCCAACCTCGCACACAACATGGCGATGCGAGGCGCTTCGGAAGGTTTTGGTGCGTTGAAACTTCAAGGAATGGTGTTAATTCATCCTTTCTTTGGAAATGATGAGAAAGATGAGCTTGTTGAGTATTTATATCCAAGTTATGGTGGATTTAATGATTCGAAAATACACGCCGCGAAGGATCCGAAACTTTCAAGTCTTGGAGTTGAGAGAGTTCTTGTGTTTGTGGCGGAGAAGGATTTTTTGAGAGAAAGAGGGAGGAGTTATTATGAGGCTGTGAAGAAAAGTGGGTGGAATGGGGAGGTGGAGATGGTGGAGACGGAAGGTGAAGGTCATGTGTTTCATTTGTTTGAGCCTGCTAAGGAGAAATCTGTGAATCTTGTTAAACAGTTTGCATCTTACATGATGCAGATTGAGAAAGGCCCACCTCCTTCCCTCCCATCGCCGGCCACCAAGCCTCCATCTCCAGATCGCTTCCCTCCTTCTCTTTCTGGAAGGAACAGTTGTAGCAATTCACAAGAACAACACAAGGTGGAGCCACTTGTGCATCTACTACGCTAA 1038 0.4692 MDQNSNEILREFPNLFRQYKDGRVERFLGSEITPPGTDKLTGVQSKDITINADTGIGARLFLPPNATPSKKLPLLIYIHGGAFCICTPFNPGYHRHANNVAAAANVVVFSIHYRLAPEHPLPIAYDDTWEAIQWVSKSSDPWLKDHADYNVVFFAGDSAGANLAHNMAMRGASEGFGALKLQGMVLIHPFFGNDEKDELVEYLYPSYGGFNDSKIHAAKDPKLSSLGVERVLVFVAEKDFLRERGRSYYEAVKKSGWNGEVEMVETEGEGHVFHLFEPAKEKSVNLVKQFASYMMQIEKGPPPSLPSPATKPPSPDRFPPSLSGRNSCSNSQEQHKVEPLVHLLR 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g01893 345 SUPERFAMILY alpha/beta-Hydrolases 27 296 IPR029058 -
Trre8g01893 345 PANTHER ARYLACETAMIDE DEACETYLASE 12 280 - -
Trre8g01893 345 MobiDBLite consensus disorder prediction 297 345 - -
Trre8g01893 345 Gene3D alpha/beta hydrolase 14 298 IPR029058 -
Trre8g01893 345 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 152 164 IPR033140 -
Trre8g01893 345 MobiDBLite consensus disorder prediction 301 319 - -
Trre8g01893 345 MobiDBLite consensus disorder prediction 320 336 - -
Trre8g01893 345 Pfam alpha/beta hydrolase fold 75 274 IPR013094 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g01893 Trre-Chr8 15104511 15107156 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g01893 6 294 Carbohydrate Esterase AT3G48700 39.938 6.59e-76 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g01893 - - mtr:11445231 523.472