Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g01850 ATGGCATTGGATAACCATTCACGTTCTCTCGAGATATTAGTTCGAAGGCCTGAAGAATTATCATTATGGACTGGACCTCCATTCCCAAATGGTCAACCTAATGTCAAACTTGATAAAGTTAATTGCTTGAATGCAAAATTTAGTGATAATGGATCTTTGCTTATGGTGGTCAAATCTAATTCTGTGATTAGTATTTATGATTGTAAGAATGCTAAAGAGATTAGGTCTTTTGAAATTCCTAATCTTGTGGCTTCTGTTTTGTCCCCTTGTGGAACTTATTTGCAAACCTTTCAAAAACCTTCCGGACCGCAAGATAAGAATGTCACATTATGGAAAACGGAGACCGGTGATACTGTTTATCAACATTCTCAAAAGAATCTGACAAAAACCAATTGGCCTTCAATTCAATTCAGCTCCGATGAAGCTACTGCGTGCCGTGTAGCAACTAATGAGGTGCAGTTTTTCGACGCTGGGGATTTTTCTAAAGGATTTATTTGTCGGTTAAGAGTTCCAGGAGTTGCTTCTGCCGAGCTTTCTAGTTCACCTGCTTCTCATGTAGCTGCATTTGTTCCAGAATCCAAGGGTGTTCCTGCTAGTGTACAAATATTTGCTTGTGAAAATGCTTCCCAAGGTCAACCTGTGGCTCGACGGAGCTTTTTCCGATGTTCTACCACCCAACTTAAATGGAATCATGGTTCAACTGGACTTCTAATTCTGGTGCAGTCTGATGTTGATAAAACCAATCAGAGTTACTATGGAGAATCGAAGTTATACTACCTGACAACAGATGGGGTGCATGAAGGATTAGTTCCTCTTCGGAAAGAGGGGCCTATTCATGATGCTCAGTGGTCATATTCAGGCTTAGAATTTGCTGTTGTGTATGGGTTTATGCCTGCTAAAGCAACTCTGTTTGACAAGAAGTGCAATCCTCTACTGGAGCTTGGAACTGGTCCTTACAACACTATTCGATGGAACCCGAAAGGGAAATTTTTATGTTTGGCTGGCTTCGGTAACTTGCCTGGTGATATGGTATTTTGGGATTACATAGAAAAGAAACAGCTTGCAGCAACCAAGGCTGAATGGTCCGTGACAAGTGAATGGTCTCCAGATGGGTGCTATTTCATGACAGCGACAACAGCTCCAAGGCTTCAAGTTGACAATGGGATCAAGATTTTTCACTATAATGGCTCATTGTACTTCAAGAAGATGTTTGACAAATTGTACCAGGCTGATTGGAAACCAGAGTCACCAAGTAAGTTTGGTGACATCACCGAATTAATCAAGTCTCTAGACTCAGTAAAACTTGAAGATAAAAAACCATCAGGTCAAGGATCAAAACCAACCCAGGCATCTACAAAAGCCCCTTCTGCCAACCCAACTGCACAAAAACCTGCCGCATATCGTCCACCACATGCTAAGACTGCGGCTGTTATTCAGGCACAGTTGTTAGGAGAGAGCTCGGCAGAGTCATTGAGCAAGAATGCTTTGCGAAACAAGAAAAAGAGGGAGAAACAGAAGGAGAAAAAGGCTGCTGCAGATGCTAGTTCGTGA 1551 0.4191 MALDNHSRSLEILVRRPEELSLWTGPPFPNGQPNVKLDKVNCLNAKFSDNGSLLMVVKSNSVISIYDCKNAKEIRSFEIPNLVASVLSPCGTYLQTFQKPSGPQDKNVTLWKTETGDTVYQHSQKNLTKTNWPSIQFSSDEATACRVATNEVQFFDAGDFSKGFICRLRVPGVASAELSSSPASHVAAFVPESKGVPASVQIFACENASQGQPVARRSFFRCSTTQLKWNHGSTGLLILVQSDVDKTNQSYYGESKLYYLTTDGVHEGLVPLRKEGPIHDAQWSYSGLEFAVVYGFMPAKATLFDKKCNPLLELGTGPYNTIRWNPKGKFLCLAGFGNLPGDMVFWDYIEKKQLAATKAEWSVTSEWSPDGCYFMTATTAPRLQVDNGIKIFHYNGSLYFKKMFDKLYQADWKPESPSKFGDITELIKSLDSVKLEDKKPSGQGSKPTQASTKAPSANPTAQKPAAYRPPHAKTAAVIQAQLLGESSAESLSKNALRNKKKREKQKEKKAAADASS 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g01850 516 MobiDBLite consensus disorder prediction 434 474 - -
Trre8g01850 516 PIRSF Transl_init_eIF2A 5 516 IPR011387 GO:0003743|GO:0006413
Trre8g01850 516 MobiDBLite consensus disorder prediction 442 459 - -
Trre8g01850 516 SUPERFAMILY DPP6 N-terminal domain-like 42 395 - -
Trre8g01850 516 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2A 10 512 IPR011387 GO:0003743|GO:0006413
Trre8g01850 516 FunFam Eukaryotic translation initiation factor 2A 199 422 - -
Trre8g01850 516 Coils Coil 493 516 - -
Trre8g01850 516 MobiDBLite consensus disorder prediction 488 516 - -
Trre8g01850 516 FunFam Eukaryotic translation initiation factor 2A 30 185 - -
Trre8g01850 516 Gene3D - 33 391 IPR015943 GO:0005515
Trre8g01850 516 Pfam Eukaryotic translation initiation factor eIF2A 217 410 IPR013979 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g01850 Trre-Chr8 14748595 14753373 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g01850 87 418 Eukaryotic Initiation Factors Gene Family AT5G27640 24.309 4.74e-21 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g01850 K15026 - gmx:100811589 887.486