Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g01838 ATGGGAAAGAAAGGGGGTTGGTTTTCAGCAATCAAGAGGGTTTTCACACACCACTCCAAAGGGAAGCAGGATTCAGATAACAAAAGCACAAAAGAGAAGAAGAAAGGTCTAGGAAAACTAAAGCATGGAGAGACCAATTCTTTTATCCCTATCTTCAGAGAGCCAAGCAGCATTGAAAAAATATTCGGTGACTTCGAAAGAGAGCAACAAGTACTTACAATTAGGCCTCCAACACCTCCCGAGAGACCGAAAACGCCACCTTTTGTCCCTCCTAGAGTTGCTTCTCCTAGGCCTCCTTCTCCAAAGCCTCCTTCTCCAAGGGCTCCATCTCCGAGAGTTGCTTCTCCCCGAGTTACCTCTCCGAAAGCTGCGTCCTCCCGGAATGTTCATCAACATAAGGAGGTTCGAAACAGACCAGAACCAACTTTACAAAACCAGAATGCCTCGGCTACTAAGATCCAGGCTGCTTACAGAGGTTATACGGGCCGGAGGAGTTTTAGAGCTCTGAAAGGTTTGGTAAGGCTTCAAGGAGTGGTAAGAGGACAGAATGTGAAGAGACAGACAGTTAGTGCCATGAAACACATGCAGCTGTTAGTGCGAGTTCAATCTCAGATTCAATCTCGACGAATTCAGATGTTGGAAAACCAGGCACGATATCAAGCCGAGTTCAAGAATGATAAGGACGCTGGTAGTACCTTTGGCAAACTGACTTCTGAGGCAGGTAACGGTGAAGATTGGGATGATAGCTTACTGACAAAAGAGGAAGTAGAAGCAAGGTTGCAGAGGAAGGTTGAAGCAATCATCAAAAGAGAGAGAGCAATGGCATTTGCATATTCACATCAGTTGTGGAAGGCGACTCCAAAATCAACTCAAACACAGGCGACAGATATGCGAGCGAGCGGATTCCCATGGTGGTGGAACTGGTTGGAAAGACAACTACCAGCAGTAGAAAATCCACAAGAAAAACAAGTCCTAAAGAATTTTCAGCTCACACCACCAAGACCATATTCAGAACAAAAGACAAGTCCAAGACCTGGCTCAAGCTCTCAAAGGCCTTTTGCCTTTGATAACATGGATACACCAACTCCAAAATCAACAAGATCAACTATATTTCCATCTTCAAAACCATCTAGAACTCCTCCATTTAGAACTCCACAAGGTAACAGTTCAAGCATGATGTCAAAACAGTCAAGGTCAAGAGCAGTGGGATCCAATTCACCTTTCGACGTTCCGCTGAAGGATGATGATAGTCTCATGAGCTGTCCACCGTTTTCGGTTCCAAACTACATGACTCCAACTGTTTCTGCTAAGGCGAAAGTGCGTGCTAATAGTAATCCAAGAGAAAGATTTGGTGGTGGTAGTAGTGGTTGTGCAACTCCAACTCCAAGCAATGATTCGAGGAGAAGTTCATTCCCTTTGTCACAAGGTATAGGGTCATTCAAATGGAATAAAGGGTCATTGTTCTCTAGCAATAAGGATCCTCATGGCTCTCAGTCCTCTCATAGGACACCAGATAAATATCAGTCACTTGAATCTATAGGAAATGTGAGTGTGGATTCGACAGTATCGTTGCCGGCAAGGGTTGGAAGAAAGCCTTTTACAAGATTTGTGTGA 1614 0.4461 MGKKGGWFSAIKRVFTHHSKGKQDSDNKSTKEKKKGLGKLKHGETNSFIPIFREPSSIEKIFGDFEREQQVLTIRPPTPPERPKTPPFVPPRVASPRPPSPKPPSPRAPSPRVASPRVTSPKAASSRNVHQHKEVRNRPEPTLQNQNASATKIQAAYRGYTGRRSFRALKGLVRLQGVVRGQNVKRQTVSAMKHMQLLVRVQSQIQSRRIQMLENQARYQAEFKNDKDAGSTFGKLTSEAGNGEDWDDSLLTKEEVEARLQRKVEAIIKRERAMAFAYSHQLWKATPKSTQTQATDMRASGFPWWWNWLERQLPAVENPQEKQVLKNFQLTPPRPYSEQKTSPRPGSSSQRPFAFDNMDTPTPKSTRSTIFPSSKPSRTPPFRTPQGNSSSMMSKQSRSRAVGSNSPFDVPLKDDDSLMSCPPFSVPNYMTPTVSAKAKVRANSNPRERFGGGSSGCATPTPSNDSRRSSFPLSQGIGSFKWNKGSLFSSNKDPHGSQSSHRTPDKYQSLESIGNVSVDSTVSLPARVGRKPFTRFV 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g01838 537 MobiDBLite consensus disorder prediction 456 512 - -
Trre8g01838 537 MobiDBLite consensus disorder prediction 62 150 - -
Trre8g01838 537 Pfam IQ calmodulin-binding motif 148 167 IPR000048 GO:0005515
Trre8g01838 537 MobiDBLite consensus disorder prediction 228 248 - -
Trre8g01838 537 SMART iq_5 145 167 IPR000048 GO:0005515
Trre8g01838 537 MobiDBLite consensus disorder prediction 327 414 - -
Trre8g01838 537 MobiDBLite consensus disorder prediction 76 111 - -
Trre8g01838 537 MobiDBLite consensus disorder prediction 327 404 - -
Trre8g01838 537 MobiDBLite consensus disorder prediction 1 48 - -
Trre8g01838 537 Pfam Protein of unknown function (DUF4005) 398 503 IPR025064 -
Trre8g01838 537 Gene3D - 126 166 - -
Trre8g01838 537 MobiDBLite consensus disorder prediction 17 41 - -
Trre8g01838 537 ProSiteProfiles IQ motif profile. 146 174 IPR000048 GO:0005515
Trre8g01838 537 PANTHER IQ-DOMAIN 5-RELATED 1 474 - -
Trre8g01838 537 MobiDBLite consensus disorder prediction 437 512 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g01838 Trre-Chr8 14623896 14626955 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g01838 1 536 IQD Protein Family AT3G59690 53.792 2.59e-169 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g01838 - - gmx:100807777 749.584