Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g01837 ATGGGAAAGAAAGGGGGTTGGTTTTCAGCAATCAAGAGGGTTTTCACACACCACTCCAAAGGGAAGGATTCAGATAACAAAAGCACAAAAGAGAAGAAGAAAGGTCTAGGAAAACTAAAGCATGGAGAGACCAATTCTTTTATCCCTATCTTCAGAGAGCCAAGCAGCATTGAAAAAATATTCGGTGACTTCGAAAGAGAGCAACAAGTACTTACAATTAGGCCTCCAACACCTCCCGAGAGACCGAAAACGCCACCTTTTGTCCCTCCTAGAGTTGCTTCTCCTAGGCCTCCTTCTCCAAAGCCTCCTTCTCCAAGGGCTCCATCTCCGAGAGTTGCTTCTCCCCGAGTTACCTCTCCGAAAGCTGCGTCCTCCCGGAATGTTCATCAACATAAGGAGGTTCGAAACAGACCAGAACCAACTTTACAAAACCAGAATGCCTCGGCTACTAAGATCCAGGCTGCTTACAGAGGTTATACGGGCCGGAGGAGTTTTAGAGCTCTGAAAGGTTTGGTAAGGCTTCAAGGAGTGGTAAGAGGACAGAATGTGAAGAGACAGACAGTTAGTGCCATGAAACACATGCAGCTGTTAGTGCGAGTTCAATCTCAGATTCAATCTCGACGAATTCAGATGTTGGAAAACCAGGCACGATATCAAGCCGAGTTCAAGAATGATAAGGACGCTGGTAGTACCTTTGGCAAACTGACTTCTGAGGCAGGTAACGGTGAAGATTGGGATGATAGCTTACTGACAAAAGAGGAAGTAGAAGCAAGGTTGCAGAGGAAGGTTGAAGCAATCATCAAAAGAGAGAGAGCAATGGCATTTGCATATTCACATCAGTTGTGGAAGGCGACTCCAAAATCAACTCAAACACAGGCGACAGATATGCGAGCGAGCGGATTCCCATGGTGGTGGAACTGGTTGGAAAGACAACTACCAGCAGTAGAAAATCCACAAGAAAAACAAGTCCTAAAGAATTTTCAGCTCACACCACCAAGACCATATTCAGAACAAAAGACAAGTCCAAGACCTGGCTCAAGCTCTCAAAGGCCTTTTGCCTTTGATAACATGGATACACCAACTCCAAAATCAACAAGATCAACTATATTTCCATCTTCAAAACCATCTAGAACTCCTCCATTTAGAACTCCACAAGGTAACAGTTCAAGCATGATGTCAAAACAGTCAAGGTCAAGAGCAGTGGGATCCAATTCACCTTTCGACGTTCCGCTGAAGGATGATGATAGTCTCATGAGCTGTCCACCGTTTTCGGTTCCAAACTACATGACTCCAACTGTTTCTGCTAAGGCGAAAGTGCGTGCTAATAGTAATCCAAGAGAAAGATTTGGTGGTGGTAGTAGTGGTTGTGCAACTCCAACTCCAAGCAATGATTCGAGGAGAAGTTCATTCCCTTTGTCACAAGGTATAGGGTCATTCAAATGGAATAAAGGGTCATTGTTCTCTAGCAATAAGGATCCTCATGGCTCTCAGTCCTCTCATAGGACACCAGATAAATATCAGTCACTTGAATCTATAGGAAATGTGAGTGTGGATTCGACAGTATCGTTGCCGGCAAGGGTTGGAAGAAAGCCTTTTACAAGATTTGTGTGA 1611 0.4457 MGKKGGWFSAIKRVFTHHSKGKDSDNKSTKEKKKGLGKLKHGETNSFIPIFREPSSIEKIFGDFEREQQVLTIRPPTPPERPKTPPFVPPRVASPRPPSPKPPSPRAPSPRVASPRVTSPKAASSRNVHQHKEVRNRPEPTLQNQNASATKIQAAYRGYTGRRSFRALKGLVRLQGVVRGQNVKRQTVSAMKHMQLLVRVQSQIQSRRIQMLENQARYQAEFKNDKDAGSTFGKLTSEAGNGEDWDDSLLTKEEVEARLQRKVEAIIKRERAMAFAYSHQLWKATPKSTQTQATDMRASGFPWWWNWLERQLPAVENPQEKQVLKNFQLTPPRPYSEQKTSPRPGSSSQRPFAFDNMDTPTPKSTRSTIFPSSKPSRTPPFRTPQGNSSSMMSKQSRSRAVGSNSPFDVPLKDDDSLMSCPPFSVPNYMTPTVSAKAKVRANSNPRERFGGGSSGCATPTPSNDSRRSSFPLSQGIGSFKWNKGSLFSSNKDPHGSQSSHRTPDKYQSLESIGNVSVDSTVSLPARVGRKPFTRFV 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g01837 536 Pfam Protein of unknown function (DUF4005) 397 502 IPR025064 -
Trre8g01837 536 MobiDBLite consensus disorder prediction 326 413 - -
Trre8g01837 536 MobiDBLite consensus disorder prediction 75 110 - -
Trre8g01837 536 MobiDBLite consensus disorder prediction 326 403 - -
Trre8g01837 536 PANTHER IQ-DOMAIN 5-RELATED 1 473 - -
Trre8g01837 536 MobiDBLite consensus disorder prediction 227 247 - -
Trre8g01837 536 MobiDBLite consensus disorder prediction 1 149 - -
Trre8g01837 536 Gene3D - 125 165 - -
Trre8g01837 536 MobiDBLite consensus disorder prediction 16 40 - -
Trre8g01837 536 MobiDBLite consensus disorder prediction 436 511 - -
Trre8g01837 536 ProSiteProfiles IQ motif profile. 145 173 IPR000048 GO:0005515
Trre8g01837 536 MobiDBLite consensus disorder prediction 455 511 - -
Trre8g01837 536 Pfam IQ calmodulin-binding motif 147 166 IPR000048 GO:0005515
Trre8g01837 536 SMART iq_5 144 166 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g01837 Trre-Chr8 14623896 14626955 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g01837 1 535 IQD Protein Family AT3G59690 53.263 2.43e-167 483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g01837 - - gmx:100807777 750.74