Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g01823 ATGGAAGGAGGAGGAGCTCCGCCTGCCGACACCGTGATGTCGGATGCAGCACCACCGGTTCCACAACAGCAGATGGGGATCGAGAATATTCCGGCAACCCTTAGCCATGGTGGTAGGTTCATTCAATACAACATATTCGGTAACATGTTTGAAGTTACTGCTAAATACAAACCACCCATCATGCCAATCGGTAAAGGTGCTTACGGTATTGTTTGCTCTGCTCATAATTCCGAGACAAATGAACATGTTGCCATCAAGAAGATTGCAAATGCTTTTGATAATAGAATTGATGCCAAGAGGACTCTCCGTGAAATCAAGCTGCTTCGTCACATGGATCATGAAAACGTGGTCGCAATCAGGGATATAATACCACCACCTCAGAGGGAGGTATTCAATGATGTTTACATTGCATATGAGCTAATGGACACTGATCTGCACCAAATCATTCGATCAAATCAAGCACTGTCGGAGGAGCACTGTCAGTATTTTCTGTACCAAATCCTTCGTGGGTTGAAGTATATACATTCTGCGAATGTTCTGCACAGGGACTTAAAACCAAGCAACCTTCTCCTAAATGCCAACTGCGACTTAAAGATTTGTGATTTTGGACTGGCCCGTGTAACCTCCGAAACTGATTTTATGACTGAATATGTTGTTACAAGATGGTACCGTGCACCGGAGCTTCTGTTAAACTCTTCTGATTATACAGCAGCAATTGATGTATGGTCTGTTGGCTGTATTTTCATGGAACTGATGGATCGAAAGCCTTTGTTTCCTGGCAGAGATCATGTGCATCAGTTGCGTCTACTCATGGAGTTGATCGGTACCCCAACAGAAGCTGATTTGGGGTTTCTGAATGAAAATGCTAAGAGATACATTAGGCAACTTCCTCCTTACCACCGCCAATCTTTACTAGAAAAGTTTCCGCATGTCCATCCTGAAGCTATAGATCTTGTTGAAAAAATGTTAACTTTTGATCCTAGAAAAAGAATTACTGTGGAGGATGCATTGGCACACCCCTACTTAACATCTCTGCATGACATCAGTGATGAACCTGTGTGCATGACTCCCTTCAGCTTTGATTTTGAACAGCATGCGTTGACCGAGGAACAGATGAAAGAACTGATATACAGAGAGGCTCTAGCATTTAACCCCGAGTACCAGCAGTAG 1170 0.435 MEGGGAPPADTVMSDAAPPVPQQQMGIENIPATLSHGGRFIQYNIFGNMFEVTAKYKPPIMPIGKGAYGIVCSAHNSETNEHVAIKKIANAFDNRIDAKRTLREIKLLRHMDHENVVAIRDIIPPPQREVFNDVYIAYELMDTDLHQIIRSNQALSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARVTSETDFMTEYVVTRWYRAPELLLNSSDYTAAIDVWSVGCIFMELMDRKPLFPGRDHVHQLRLLMELIGTPTEADLGFLNENAKRYIRQLPPYHRQSLLEKFPHVHPEAIDLVEKMLTFDPRKRITVEDALAHPYLTSLHDISDEPVCMTPFSFDFEQHALTEEQMKELIYREALAFNPEYQQ 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g01823 389 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 55 343 - -
Trre8g01823 389 Gene3D Phosphorylase Kinase; domain 1 40 379 - -
Trre8g01823 389 ProSiteProfiles Protein kinase domain profile. 57 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g01823 389 FunFam Mitogen-activated protein kinase 42 151 - -
Trre8g01823 389 SUPERFAMILY Protein kinase-like (PK-like) 62 350 IPR011009 -
Trre8g01823 389 Gene3D Transferase(Phosphotransferase) domain 1 141 369 - -
Trre8g01823 389 ProSitePatterns Serine/Threonine protein kinases active-site signature. 179 191 IPR008271 GO:0004672|GO:0006468
Trre8g01823 389 Pfam Protein kinase domain 62 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g01823 389 FunFam Mitogen-activated protein kinase 141 369 - -
Trre8g01823 389 CDD STKc_TEY_MAPK 50 385 - -
Trre8g01823 389 ProSitePatterns Protein kinases ATP-binding region signature. 63 87 IPR017441 GO:0005524
Trre8g01823 389 ProSitePatterns MAP kinase signature. 92 195 IPR003527 GO:0004707|GO:0005524|GO:0006468
Trre8g01823 389 SMART serkin_6 57 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g01823 Trre-Chr8 14487843 14492367 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g01823 1 389 MAP Kinase Gene Family AT2G43790 88.131 0.0 697
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Trre8g01823 Pkinase 3.7e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g01823 K14512 - gmx:547616 756.903