Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g01820 ATGTCTTCCTCTTCACCACCACAATCTTTTTCTCCACCTTTCTTTCCAATTTATCAGTCACCACCACAACCTCCTTCACCACCTTTCCTCGCTACTTTCCCAGCTAACATCTCTTCCTTACTCCTTCCAACACCTCATACTAAAACCCATAACCACCGTTCCGCCGCCGTTCTCCTCATCTCCCTCTCTCTTTTCTCTATCCTCCTCCTCACCTTATCTGCTTTTTTTGCCTATCACCGTCGTCATCACAACCACAAAACTTCCTCCACCACTGCAAACGACGATACTGCTTCAAGATCAGATAGTCTCCGTTTATTCCCGCCGAACACCGCCACTTCAGACTCCGTCGACAGTAAACCATCATCTGGGTCGGAGATATTCCACCTCGGAACCATATCAAGCTCAGAAAACATCAAAGTTACTGCAGAATCAAGCTGTAATGGCAATGTCGGTTTCTCTCCGTCGTACCGGAATCTTACAGACTCACCGGAGCTTCGTCCTTTACCTCCTCTACCACGTCACAATGTCAGAACATCGAAGAATCAACCAAAGAAAGAAGAACACATAGCAAGAGAAGATGAAGAACAGTTTCATTCACCAAAAGCTTCTCCTTCTGCTGCAACAACCTCTCACTTTGATAAATTTGGTAGCAAAAGCTTAACTTCAAGAACATCTTCATACCCTCTTTCACGTTCACCTTCTCTCAATCTTAGCCCTATTGAAAGTATCAATTCATTTCCACCTCAGAACTCTGCATCTCCAAGTTTTTCTGCTTCCTCTTCACCTATGGAGAGGGAAGATTTGGATGGTAAGAATGTTCAAGTGAGCAAACTTTCTGCTCCTGCTCCGCCGCCTCTGCCGCCGAGGTTTTGGGAGACTCCGGTAGTGGCTTCTCATGATGTTAGGATTGAGAATGAGGAAAGTTCAAAGCCAAAGTTAAAGGCTTTACATTGGGATAAAGTTAAGGCCAGCTCAGATAGGGCCATGGTTTGGGATCATTTGAGACCAAGTTCATTTCAGTTGAATGAAGACATGATTGAGTCACTTTTTATGGTAAATAATTCCAATTCCAATGGAAGTTCTGCTTTGGCTCCTAAAGATAATGCTCGGAGCCAAATAATCCATACTGCTCCAATGCAGCCGGAAAATAGGGTGCTTGATCCTAAGAAGTCTCAGAATATTGCCATTTTGCTTCGAGCGCTGAATGTAACTATTGATGAAGTTTGTGAAGCCCTCCGAGAAGGCAATTGTGATACACTGGGAACAGAACTTCTAGAAAGTTTATTAAAGATGGCCCCAACTAAGGAGGAAGAATCTAAGCTGAAGGAGTTTAAAGATGAGTCACCCTTCAAGCTAGGCCCGGCTGAGAAATTTCTTAAAGTCATTCTTGATATACCTTTTGCATTCAAAAGAATGGATGCTATGCTCTACATTGCTAATTTTGATTCAGAATTAGAATACCTGAAGAAATCTTTTGATACTCTGGAGGTGGCTTGTGAGGAATTAAAGAATAGCAGAATGTTTATGAAGATACTAGAGGCAGTTCTTAGAACAGGAAATCGAATGAATGTTGGCACCGATCGTGGTGATGCACAGGCATTCAAACTGGACACACTTTTGAAGTTAGTTGATATTAAGGGAACTGACAGAAAGACTACTCTTTTACATTTCGTTGTACAAGAAATTGTTAGAACCGAGGGTTATCATGTATCTGGTGCTGACCATCACAATGTTGACTCTTTCAACAACCATCAGTGTAATCTTCAAGATGAGGTTGACTCGAGGAAGCTAGGACTGCAAGTTGTATCAGGTTTGAGTGGAGAACTCACCAATGTTAAAAAGGTTGCTGTTATGGATTCAGACACGCTGAGTAGCGATGTTGCTAAACTTGCCAAAGGAATCGAAAAGGTTGTGCTAGTTGTAAAATTGAATGAAGAGTCACCTTTGAAAGAAACCAACCAAAAATTTTCTGAGGCAATGAAAGGTTTCTTGGAGAGGGGTCAGGAAGAGATTTCAAGAATCCAGGCGCAAGAGAAAAGTGCCATCTCTTCAGTGAAGGAGGTAACTGAGTATTTCCATGGTAATTCGGCAAAGGAAGAAGCTCATCCGTTTAGGATATTTATGGTTGTGAGGGATTTCCTTTCGATACTAGATGGCGTATGCAAGCAAGTTGGGAAAGCAAATGAGAGGACTTTAGTTGGTTCACGGCTAGATGTAACACCTTCAATCACTACACTGCCATCAATTTTCCCCGAGTTTAATGGTAAGCAACCATCTGGCGATTCCTCGGAATCTGATTAG 2301 0.4246 MSSSSPPQSFSPPFFPIYQSPPQPPSPPFLATFPANISSLLLPTPHTKTHNHRSAAVLLISLSLFSILLLTLSAFFAYHRRHHNHKTSSTTANDDTASRSDSLRLFPPNTATSDSVDSKPSSGSEIFHLGTISSSENIKVTAESSCNGNVGFSPSYRNLTDSPELRPLPPLPRHNVRTSKNQPKKEEHIAREDEEQFHSPKASPSAATTSHFDKFGSKSLTSRTSSYPLSRSPSLNLSPIESINSFPPQNSASPSFSASSSPMEREDLDGKNVQVSKLSAPAPPPLPPRFWETPVVASHDVRIENEESSKPKLKALHWDKVKASSDRAMVWDHLRPSSFQLNEDMIESLFMVNNSNSNGSSALAPKDNARSQIIHTAPMQPENRVLDPKKSQNIAILLRALNVTIDEVCEALREGNCDTLGTELLESLLKMAPTKEEESKLKEFKDESPFKLGPAEKFLKVILDIPFAFKRMDAMLYIANFDSELEYLKKSFDTLEVACEELKNSRMFMKILEAVLRTGNRMNVGTDRGDAQAFKLDTLLKLVDIKGTDRKTTLLHFVVQEIVRTEGYHVSGADHHNVDSFNNHQCNLQDEVDSRKLGLQVVSGLSGELTNVKKVAVMDSDTLSSDVAKLAKGIEKVVLVVKLNEESPLKETNQKFSEAMKGFLERGQEEISRIQAQEKSAISSVKEVTEYFHGNSAKEEAHPFRIFMVVRDFLSILDGVCKQVGKANERTLVGSRLDVTPSITTLPSIFPEFNGKQPSGDSSESD 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g01820 766 Pfam Formin Homology 2 Domain 305 717 IPR015425 -
Trre8g01820 766 MobiDBLite consensus disorder prediction 84 123 - -
Trre8g01820 766 Gene3D Formin, FH2 domain 311 734 IPR042201 -
Trre8g01820 766 PANTHER FORMIN-RELATED 22 754 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Trre8g01820 766 ProSiteProfiles Formin homology-2 (FH2) domain profile. 303 743 IPR015425 -
Trre8g01820 766 MobiDBLite consensus disorder prediction 201 262 - -
Trre8g01820 766 MobiDBLite consensus disorder prediction 90 123 - -
Trre8g01820 766 MobiDBLite consensus disorder prediction 157 271 - -
Trre8g01820 766 MobiDBLite consensus disorder prediction 179 199 - -
Trre8g01820 766 SUPERFAMILY Formin homology 2 domain (FH2 domain) 281 730 - -
Trre8g01820 766 SMART it6_source 303 732 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g01820 Trre-Chr8 14469590 14472780 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g01820 306 735 FH2 protein (formin) Gene Family AT3G25500 67.517 0.0 581
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g01820 - - vun:114175163 870.922