Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g01819 ATGTCTAAAATCATCTTAACCACACTCTTCCTCTTTTTTTTCTCATCAACTGTTTCTTCTTCTTCCTACCACCAACACCACCGCCGTATCCTCCATCAACCACTCTTTCCATCTATCTCTCTTCCACCAACACAACCACCATCTTCATCACCACAAACTCAACCAAAACCACAACCAAAGCTTCCATTTTCTTCCATGTCTTCCTCTTCACCACCACAATCTTTTTCTCCACCTTTCTTTCCAATTTATCAGTCACCACCACAACCTCCTTCACCACCTTTCCTCGCTACTTTCCCAGCTAACATCTCTTCCTTACTCCTTCCAACACCTCATACTAAAACCCATAACCACCGTTCCGCCGCCGTTCTCCTCATCTCCCTCTCTCTTTTCTCTATCCTCCTCCTCACCTTATCTGCTTTTTTTGCCTATCACCGTCGTCATCACAACCACAAAACTTCCTCCACCACTGCAAACGACGATACTGCTTCAAGATCAGATAGTCTCCGTTTATTCCCGCCGAACACCGCCACTTCAGACTCCGTCGACAGTAAACCATCATCTGGGTCGGAGATATTCCACCTCGGAACCATATCAAGCTCAGAAAACATCAAAGTTACTGCAGAATCAAGCTGTAATGGCAATGTCGGTTTCTCTCCGTCGTACCGGAATCTTACAGACTCACCGGAGCTTCGTCCTTTACCTCCTCTACCACGTCACAATGTCAGAACATCGAAGAATCAACCAAAGAAAGAAGAACACATAGCAAGAGAAGATGAAGAACAGTTTCATTCACCAAAAGCTTCTCCTTCTGCTGCAACAACCTCTCACTTTGATAAATTTGGTAGCAAAAGCTTAACTTCAAGAACATCTTCATACCCTCTTTCACGTTCACCTTCTCTCAATCTTAGCCCTATTGAAAGTATCAATTCATTTCCACCTCAGAACTCTGCATCTCCAAGTTTTTCTGCTTCCTCTTCACCTATGGAGAGGGAAGATTTGGATGGTAAGAATGTTCAAGTGAGCAAACTTTCTGCTCCTGCTCCGCCGCCTCTGCCGCCGAGGTTTTGGGAGACTCCGGTAGTGGCTTCTCATGATGTTAGGATTGAGAATGAGGAAAGTTCAAAGCCAAAGTTAAAGGCTTTACATTGGGATAAAGTTAAGGCCAGCTCAGATAGGGCCATGGTTTGGGATCATTTGAGACCAAGTTCATTTCAGTTGAATGAAGACATGATTGAGTCACTTTTTATGGTAAATAATTCCAATTCCAATGGAAGTTCTGCTTTGGCTCCTAAAGATAATGCTCGGAGCCAAATAATCCATACTGCTCCAATGCAGCCGGAAAATAGGGTGCTTGATCCTAAGAAGTCTCAGAATATTGCCATTTTGCTTCGAGCGCTGAATGTAACTATTGATGAAGTTTGTGAAGCCCTCCGAGAAGGCAATTGTGATACACTGGGAACAGAACTTCTAGAAAGTTTATTAAAGATGGCCCCAACTAAGGAGGAAGAATCTAAGCTGAAGGAGTTTAAAGATGAGTCACCCTTCAAGCTAGGCCCGGCTGAGAAATTTCTTAAAGTCATTCTTGATATACCTTTTGCATTCAAAAGAATGGATGCTATGCTCTACATTGCTAATTTTGATTCAGAATTAGAATACCTGAAGAAATCTTTTGATACTCTGGAGGTGGCTTGTGAGGAATTAAAGAATAGCAGAATGTTTATGAAGATACTAGAGGCAGTTCTTAGAACAGGAAATCGAATGAATGTTGGCACCGATCGTGGTGATGCACAGGCATTCAAACTGGACACACTTTTGAAGTTAGTTGATATTAAGGGAACTGACAGAAAGACTACTCTTTTACATTTCGTTGTACAAGAAATTGTTAGAACCGAGGGTTATCATGTATCTGGTGCTGACCATCACAATGTTGACTCTTTCAACAACCATCAGTGTAATCTTCAAGATGAGGTTGACTCGAGGAAGCTAGGACTGCAAGTTGTATCAGGTTTGAGTGGAGAACTCACCAATGTTAAAAAGGTTGCTGTTATGGATTCAGACACGCTGAGTAGCGATGTTGCTAAACTTGCCAAAGGAATCGAAAAGGTTGTGCTAGTTGTAAAATTGAATGAAGAGTCACCTTTGAAAGAAACCAACCAAAAATTTTCTGAGGCAATGAAAGGTTTCTTGGAGAGGGGTCAGGAAGAGATTTCAAGAATCCAGGCGCAAGAGAAAAGTGCCATCTCTTCAGTGAAGGAGGTAACTGAGTATTTCCATGGTAATTCGGCAAAGGAAGAAGCTCATCCGTTTAGGATATTTATGGTTGTGAGGGATTTCCTTTCGATACTAGATGGCGTATGCAAGCAAGTTGGGAAAGCAAATGAGAGGACTTTAGTTGGTTCACGGCTAGATGTAACACCTTCAATCACTACACTGCCATCAATTTTCCCCGAGTTTAATGGTAAGCAACCATCTGGCGATTCCTCGGAATCTGATTAG 2496 0.4243 MSKIILTTLFLFFFSSTVSSSSYHQHHRRILHQPLFPSISLPPTQPPSSSPQTQPKPQPKLPFSSMSSSSPPQSFSPPFFPIYQSPPQPPSPPFLATFPANISSLLLPTPHTKTHNHRSAAVLLISLSLFSILLLTLSAFFAYHRRHHNHKTSSTTANDDTASRSDSLRLFPPNTATSDSVDSKPSSGSEIFHLGTISSSENIKVTAESSCNGNVGFSPSYRNLTDSPELRPLPPLPRHNVRTSKNQPKKEEHIAREDEEQFHSPKASPSAATTSHFDKFGSKSLTSRTSSYPLSRSPSLNLSPIESINSFPPQNSASPSFSASSSPMEREDLDGKNVQVSKLSAPAPPPLPPRFWETPVVASHDVRIENEESSKPKLKALHWDKVKASSDRAMVWDHLRPSSFQLNEDMIESLFMVNNSNSNGSSALAPKDNARSQIIHTAPMQPENRVLDPKKSQNIAILLRALNVTIDEVCEALREGNCDTLGTELLESLLKMAPTKEEESKLKEFKDESPFKLGPAEKFLKVILDIPFAFKRMDAMLYIANFDSELEYLKKSFDTLEVACEELKNSRMFMKILEAVLRTGNRMNVGTDRGDAQAFKLDTLLKLVDIKGTDRKTTLLHFVVQEIVRTEGYHVSGADHHNVDSFNNHQCNLQDEVDSRKLGLQVVSGLSGELTNVKKVAVMDSDTLSSDVAKLAKGIEKVVLVVKLNEESPLKETNQKFSEAMKGFLERGQEEISRIQAQEKSAISSVKEVTEYFHGNSAKEEAHPFRIFMVVRDFLSILDGVCKQVGKANERTLVGSRLDVTPSITTLPSIFPEFNGKQPSGDSSESD 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g01819 831 MobiDBLite consensus disorder prediction 41 82 - -
Trre8g01819 831 MobiDBLite consensus disorder prediction 244 264 - -
Trre8g01819 831 MobiDBLite consensus disorder prediction 266 327 - -
Trre8g01819 831 SUPERFAMILY Formin homology 2 domain (FH2 domain) 346 795 - -
Trre8g01819 831 SMART it6_source 368 797 IPR015425 -
Trre8g01819 831 Gene3D Formin, FH2 domain 376 799 IPR042201 -
Trre8g01819 831 ProSiteProfiles Formin homology-2 (FH2) domain profile. 368 808 IPR015425 -
Trre8g01819 831 MobiDBLite consensus disorder prediction 155 188 - -
Trre8g01819 831 MobiDBLite consensus disorder prediction 59 73 - -
Trre8g01819 831 MobiDBLite consensus disorder prediction 149 188 - -
Trre8g01819 831 Pfam Formin Homology 2 Domain 370 782 IPR015425 -
Trre8g01819 831 MobiDBLite consensus disorder prediction 222 336 - -
Trre8g01819 831 PANTHER FORMIN-RELATED 10 819 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Trre8g01819 831 MobiDBLite consensus disorder prediction 41 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g01819 Trre-Chr8 14469590 14472975 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g01819 371 800 FH2 protein (formin) Gene Family AT3G25500 67.517 0.0 582
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g01819 - - vun:114175163 878.241