Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g01799 ATGGATATTGCTGCTCAAAATTACAATAACATTTCAAATACCTTCAAACTTGCTCTATATTTTCAGGAACCAACCATGGATTCCTTCAAAGCCACTTCTCTTGCTGAAGATATGATTAAAAAGCAGAAGGTGGAAGTGATTGTAGGAATGCAGACATGGACAGAAGCAGCTTCAATAGCTGAATTAATACATGAAGCTCAAGTTAATATTCCTCTTATATCCTTTGTAGCACCTGCAATTACTCCGCCATTGATGGAGATTCGGTGGCCGTCTTTGGTGAGACTTGCTAACAATGGAACAGCATATGTGAAATGTATTGCTGATTTGGTTCATGTTTACAATTGGCATAGTGTGGTAGCCATCTATGAAGATGATGCCTATGGTGGTGATTCTGGGATGTTAGCACTGCTATCCGAGGCTCTCCAAGATGTTGGCTCGATGATTGAATATCGTTTAGCTTTGCCGTCATTAGCATATCTACCAAATCCGGGAGAGTTTATTCGTAAAGAGTTGTTTAAGATAACAGAAAACACGCAATCTCGAGTATTCATTGTATTGCAATCATCATTAGAAATGGGGATTCATTTGTTTAAGGAAGCTTCACAAATGGGACTAGTGGATAGAGATTCGGCTTGGATGATCCCCGAGAGCATAACTAATTTGTTGGATTCTATCAATAAGTCAAGTATTTCTTATATGGAGGGAGCTTTAGGAATCAAAACCTACTACTCAGAAAACAGCAAGGACTATACAAAATTTGAGGCTCAGTTCAGAAGAGCTTTTCGTGACAAAAATCCCGAGGAAGATAACCGCGACCCGGGATTTTATGCTTTGCAAGCATATGATAGCATTCAAATGATTGGAAATGCAATAGACAAGATATCTAGTGACAAAAAAACTTTACTACAAGAAATAGTGTCCAGCAATTTTCTTGGTCTAAGCGGAAAAATTAAATTTGAATCAGAACAGCTTTTGCAGAATCCTACCTTGAGGATTGTAAATGTAGATGGGAAGAGTTACAGAGAATTAGACTTGTGGAATCTTGAAAATGGATTCTTCACTAACATCTCGACAAAAGAAGGTAAAAATGGTGCTTCTAGGAACTCAGAAAGTTTAACCGGTTCAGTAATTTGGCCAGGGAAGTTGCTTACAGTTCCAAAGGGATGGAACTTACCTACTAAACAAAAGCCATTGAGAATTGCAGTCCCTGGAAGAACTGCATTTTCCAAATTTGTCAAGGTTGATTACGATGCGCGAGGAAATCCAAAATATAGTGGATTTTGCATTGAAATTTTTGACAAGGCGTTGGAAGTTTTAGGGTATGATCTTCCTTATGAATATCATCCTATCAATGGAACATATCCTGATCTTGTTCAACTTGTTTATAACAAGACTTATGACGGTGTTGTTGGCGATATGACCATACTGGCAGAGAGAATGGAATATGTAGATTTTACCGTACCATATGCAGAATCAGGATTGTCGATGATAGTTACAGAAAAGTCACAAGAATCCGCATGGATGTTTATGAAGCCCTTCACCTGGCAAATGTGGGCGGTAACGGGTGCCATCTTGATTTATACAATGTTAGTAGTATGGTACCTGGAGAAAGAAGACAATGAAGAGTTTCAAGGCAATTGGAAAAACCAAATCAGCACTTCTTTTTGGTTTACTTTCTCATCACTATTCTTTGCTCATAGGGAGAAAATGCATAGCAATTTATCTCGTGTAGTGATGGTATCGTGGTTGTTTCTAGTTTTGATTCTTAATTCAAGCTACACTGCGAGTCTTTCTTCGATGCTCACAGTTCAACAACTGCATGCAAATGTCACAGACATTGAGTGGCTGAAGAAGAACGACATGAAAATTGGTTGTGATGGAGATTCATTTGTTAGGAAATACCTAGAGGAAGTCGAAAAATTCAAACCAGGGAACATCGTCAACATTAGTAATGAAAACAATTATGACCCTGAATTCAAAAATTCCTCAATTGCAGCAGCTTTTCTCGAACTCCCTTATGAGAAAGTATACATCAGTAAATACTGCAAGGGGTACTCTGCTTCTACACCTACCACCAGATTTGGAGGACTTGGATTTATGTTCCAGAAAGGATCCCCCTTGGTCAGAGATGTTTCTAAAGCTATTTTGGAGCTCTTACAAAAGGGAGAATTGAAGAAATTAGAAGATATATGGTTGAATCCCACAAATGTGTGCTCCAACAATTTGAATTCCAAGAATACAGAAAGTTTGAAGCTAGGAAGTTTCTGGATTCTCTATGTGATTTCTGGTGCCACATCTACTATTTGTTTTCTAGTTTCTACTATCCATTCCCTGAGATCTAGACAAACAGTAAATGATGATGCACAAGAAAGTAGAGGCACCCAAAATGATGTGAGCAGATGGAAAAGGGTGGTTAAATTAAGTAGGAAAATTTGTAGCAGAAAGCATAATAAAACAAGCAAGGTAAATGAAGATGTTACTGATTCTCCTTCCAGTACCCCTGAGCATGAGCAGGGAATGGGTCATCAATTACCAGAAATCATAACAGTCTCTTCACCACCAACAGAGTTGTAA 2574 0.3831 MDIAAQNYNNISNTFKLALYFQEPTMDSFKATSLAEDMIKKQKVEVIVGMQTWTEAASIAELIHEAQVNIPLISFVAPAITPPLMEIRWPSLVRLANNGTAYVKCIADLVHVYNWHSVVAIYEDDAYGGDSGMLALLSEALQDVGSMIEYRLALPSLAYLPNPGEFIRKELFKITENTQSRVFIVLQSSLEMGIHLFKEASQMGLVDRDSAWMIPESITNLLDSINKSSISYMEGALGIKTYYSENSKDYTKFEAQFRRAFRDKNPEEDNRDPGFYALQAYDSIQMIGNAIDKISSDKKTLLQEIVSSNFLGLSGKIKFESEQLLQNPTLRIVNVDGKSYRELDLWNLENGFFTNISTKEGKNGASRNSESLTGSVIWPGKLLTVPKGWNLPTKQKPLRIAVPGRTAFSKFVKVDYDARGNPKYSGFCIEIFDKALEVLGYDLPYEYHPINGTYPDLVQLVYNKTYDGVVGDMTILAERMEYVDFTVPYAESGLSMIVTEKSQESAWMFMKPFTWQMWAVTGAILIYTMLVVWYLEKEDNEEFQGNWKNQISTSFWFTFSSLFFAHREKMHSNLSRVVMVSWLFLVLILNSSYTASLSSMLTVQQLHANVTDIEWLKKNDMKIGCDGDSFVRKYLEEVEKFKPGNIVNISNENNYDPEFKNSSIAAAFLELPYEKVYISKYCKGYSASTPTTRFGGLGFMFQKGSPLVRDVSKAILELLQKGELKKLEDIWLNPTNVCSNNLNSKNTESLKLGSFWILYVISGATSTICFLVSTIHSLRSRQTVNDDAQESRGTQNDVSRWKRVVKLSRKICSRKHNKTSKVNEDVTDSPSSTPEHEQGMGHQLPEIITVSSPPTEL 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g01799 857 Gene3D - 275 397 - -
Trre8g01799 857 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 30 796 IPR015683 -
Trre8g01799 857 Gene3D - 506 639 - -
Trre8g01799 857 PIRSF IGluLR_plant 1 849 IPR017103 -
Trre8g01799 857 Pfam Ligand-gated ion channel 734 763 IPR001320 GO:0015276|GO:0016020
Trre8g01799 857 Pfam Bacterial extracellular solute-binding proteins, family 3 421 733 IPR001638 -
Trre8g01799 857 SUPERFAMILY Periplasmic binding protein-like I 10 389 IPR028082 -
Trre8g01799 857 Gene3D - 1 105 - -
Trre8g01799 857 SMART GluR_14 397 734 IPR001320 GO:0015276|GO:0016020
Trre8g01799 857 Gene3D - 106 271 - -
Trre8g01799 857 FunFam Glutamate receptor 506 644 - -
Trre8g01799 857 CDD PBP1_GABAb_receptor_plant 1 356 IPR044440 -
Trre8g01799 857 FunFam Glutamate receptor 102 271 - -
Trre8g01799 857 Pfam Receptor family ligand binding region 7 337 IPR001828 -
Trre8g01799 857 MobiDBLite consensus disorder prediction 816 857 - -
Trre8g01799 857 SUPERFAMILY Periplasmic binding protein-like II 374 733 - -
Trre8g01799 857 FunFam Glutamate receptor 397 507 - -
Trre8g01799 857 CDD GluR_Plant 396 732 - -
Trre8g01799 857 Gene3D - 398 505 - -
Trre8g01799 857 Gene3D - 679 740 - -
Trre8g01799 857 MobiDBLite consensus disorder prediction 824 838 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g01799 Trre-Chr8 14328206 14331509 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g01799 14 793 Ion Channels AT2G29120 35.547 1.28e-143 447