Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g01796 ATGTCTGTCCCTTCTTCTTCTTTATTTGTATTCACTTTTTCTTTGTTTGTTTTCTTCATTTTGAATGAAGATTCATCATGCTTAGCAATATTTAGCAGCAACATTACACGCATTCCTCGCCAGCTTAGAGTTGATTACTATGCTAAATCTTGTCCTCAGTTAGAACAGCTTGTTGGTTCAGTCACTTCTCAACAATTCAAACAATCACCTGTTTCTGGACCTGCCACCATTCGTCTCCTTTTCCATGATTGCTTTGTCGAAGGTTGTGATGCATCAATTTTAATCGCATCAAAGCCAGGTAGCAAGGAGTTGGCAGAGAAAGATGCAGAGGATAATAAAGATTTGAGGGTGGAAGGTTTTGAGACTATAAAGAAGGCAAAGGAAGTGGTGGAAAAAAAGTGTCCTAATGTAGTGTCTTGTGCAGACATTCTTGCAATTGCAGCTAGAGATTTTGTGCACCTGGCAGGGGGACCATATTATCAAGTAAAGAAGGGAAGATGGGATGGAAAGATATCAATGGCATCAAGGGTAGGGTCAAACATTCCTCGTGCAAACTCAACCGTCGATGAGCTTATCAAACTTTTCAGCTCGAAAGGCTTAACCACACAGGACATGGTTGCACTTTCTGGGGCTCACACAATTGGGTTTTCTCATTGCAAGAACTTTGTGACTCGCCTTTACAATTACCGGGGCAAGGGTCAACCCGATCCGGATATGAACCCTAAACTATTGCAAGCTCTTAGAATGTACTGTCCAAATTTTGGTGGAAACTCAGATATTGTTGCACCATTTGATGCAACTACTCCTTTCATATTTGACCATGCATATTATGGTAACTTGCAGAGCAAGATGGGTTTGTTAGCTTCCGACCAAGCTTTGGCTTTGGACCCGCGAACCAAGTCACTGGTTCAAGATTTTGCAAAAGATAAGCAGAAGTTTTTTCAAGCTTTTGTAGCTGCTATAGACAAAATGAGTTTAGTGAATGTTGTGAGAGGGAAAAGGCATGGGGAGAAAAGAAGAGATTGTAGCATGCATATGTAA 1041 0.4102 MSVPSSSLFVFTFSLFVFFILNEDSSCLAIFSSNITRIPRQLRVDYYAKSCPQLEQLVGSVTSQQFKQSPVSGPATIRLLFHDCFVEGCDASILIASKPGSKELAEKDAEDNKDLRVEGFETIKKAKEVVEKKCPNVVSCADILAIAARDFVHLAGGPYYQVKKGRWDGKISMASRVGSNIPRANSTVDELIKLFSSKGLTTQDMVALSGAHTIGFSHCKNFVTRLYNYRGKGQPDPDMNPKLLQALRMYCPNFGGNSDIVAPFDATTPFIFDHAYYGNLQSKMGLLASDQALALDPRTKSLVQDFAKDKQKFFQAFVAAIDKMSLVNVVRGKRHGEKRRDCSMHM 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g01796 346 PANTHER - 28 344 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre8g01796 346 FunFam Peroxidase 45 191 - -
Trre8g01796 346 PRINTS Haem peroxidase superfamily signature 73 87 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre8g01796 346 PRINTS Haem peroxidase superfamily signature 265 280 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre8g01796 346 PRINTS Haem peroxidase superfamily signature 204 219 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre8g01796 346 PRINTS Haem peroxidase superfamily signature 138 155 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre8g01796 346 PRINTS Haem peroxidase superfamily signature 156 168 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre8g01796 346 SUPERFAMILY Heme-dependent peroxidases 41 344 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trre8g01796 346 Pfam Peroxidase 61 309 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre8g01796 346 ProSitePatterns Peroxidases active site signature. 73 84 IPR019794 GO:0004601
Trre8g01796 346 Gene3D Peroxidase, domain 2 182 324 - -
Trre8g01796 346 PRINTS Plant peroxidase signature 156 171 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre8g01796 346 PRINTS Plant peroxidase signature 51 70 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre8g01796 346 PRINTS Plant peroxidase signature 137 147 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre8g01796 346 PRINTS Plant peroxidase signature 279 296 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre8g01796 346 PRINTS Plant peroxidase signature 75 95 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre8g01796 346 PRINTS Plant peroxidase signature 203 215 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre8g01796 346 PRINTS Plant peroxidase signature 319 332 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre8g01796 346 PRINTS Plant peroxidase signature 118 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre8g01796 346 PRINTS Plant peroxidase signature 263 278 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre8g01796 346 Gene3D - 45 344 - -
Trre8g01796 346 ProSiteProfiles Plant heme peroxidase family profile. 41 346 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre8g01796 346 FunFam Peroxidase 182 324 - -
Trre8g01796 346 ProSitePatterns Peroxidases proximal heme-ligand signature. 204 214 IPR019793 -
Trre8g01796 346 CDD secretory_peroxidase 41 343 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g01796 Trre-Chr8 14292013 14294700 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g01796 8 346 Peroxidase AT2G34060 60.983 7.97e-156 439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g01796 K00430 - gmx:100777463 561.222