Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g01791 ATGCCTAGAAAGGGAATGAGAAGCGTTTTCTTCCATCCATCCACATCATCAAAACTACTACCACCACCACCATCCTCACCTCTCCGCACTTTCTCAGACACCTTAATGGAAGAAAACATTGAAACCGCAGAATCACTTATTACAAAATGGGATTATTCCAAAAAAATCATTACTCCTCTTTTCAGTGGTAACACTCGTTTAGAAGCCAAACAGTACCTAAACGCTGTTAAAGGTTTACAATCCGCTATGCAGTATCTTGTCACACGTGATTCCACCTCTAATTCTCTTATAAAAGCTCAATTCTTAATGCAACTTGCCATGAAAACACTTCAAAAAGAATTTTATCAGATTCTATCATCAAACAGAGAATATTTAGATCCTGAAACCGTTTCTAACCGTTCCTCAGTGGATCGTAGAAGCAGTGCTTCATTTTCTGATTTTGACAGCGAAATCGAAATTTCCGACGACGAGTTTCGTGTCGCTGGAAATACTATTTCTGAGACGGAGAGAGTTTCTATGGTTGCTATGGCGGATTTGAAGGCTATTGCTGATTGTATGATAGCTTCTGGCTATGGAAAAGAGTGTGTTAAGGTTTATATTGTTATGAGAAAATCGATTGTTGATGAAGCGCTTTATCATCTCGGTGTTGAACGGTTGAGTTTTTCTCAGATTCAGAAAATGGATTGGGAAGTTATTGAGTTGAAAATCAAAACGTGGTTAAACGCTGTTAAGGTAGCAGTTGGAACTCTGTTTCACGGTGAGAGGATTCTCTGCGACGACGTGTTTGCGTCGGCGGGGAAGAGAATCGCTGAATCGTGTTTCGCGGAGATTACTAAAGAAGGTGCTATTTTACTTTTCACTTTCCCGGAAATGGTGGGAAAATGCAAGAAAACGCCGGAAAAAATGTTTAGAACACTTGATTTATACGAAGCAATCTCCGATCATTTTCAACAAATTCAATCGATTTTCTCATTTGAATCAACTTCTAACGTCCGTTTACAAGCCGTTACATCTATGACGAAACTCGCCGAAGCCGTTAAAACGATGTTAACGGATTTCGAATCAGCAATTCAGAAAGACTCATCAAAGAAACCAATCACCGGCGGTGGAGTCCATCCTCTCACGCGTTATGTAATGAACTACATCACGTTCCTCGCCGATTACAGCGGCGTGCTTTCCGATATCATTTTCGATTTACCACAATCTCCGTTGCCGGAATCTTACTATCAAAGTCCAATGCGCGGCGAGAATCAATCGTCGTCCGATATATCAGAGAAAATCGCGTGGTTGATACTCGTTCTTCTCTGTAAACACGACGGAAAAGCTGAACTCTACAAAGACGTAGCACTTTCTTATCTTTTTCTTGCGAATAACATGCAATACGTCGTCGTAAAGGTTCGTAGATCAAACCTAGGGTTTCTTCTAGGAGAAGATTGGTTAACAAATCATGAATTGAAGGTTAAAGAGTATGTGTCGAAGTTCGTGCGAGTTGGATGGAATAAAGTGCTATCAACGTTGCCGGAAAATTCAACGGTGGATATGCCGGTGGAGAAGGTTAGAGAGAGTTTTGTGAAATTCAACGCTGCGTTTGAAGAAGAGTGTAGGAAACAGTCTTCGTGGGTTGTAACCGACCCGAAACTGCGAGATGAAATCAAAGGCGCGATAGGTTCGAAGTTGGTAGCGAAATATGGTGGATTCTATGAAATGAACCGGGTCGGGTTGGAATCGGTTATTAGATATGATCTGGAAAATGTAGAGGGTTGTTTGTGTAATATTTTGTATGGGGTTGGAGATTCGGGTAGTGTTTCATCGCATTCTTCGACGTCGAGGGCGTCGTCTTCTCATGGTTCTAGTCGCGGGTGA 1863 0.416 MPRKGMRSVFFHPSTSSKLLPPPPSSPLRTFSDTLMEENIETAESLITKWDYSKKIITPLFSGNTRLEAKQYLNAVKGLQSAMQYLVTRDSTSNSLIKAQFLMQLAMKTLQKEFYQILSSNREYLDPETVSNRSSVDRRSSASFSDFDSEIEISDDEFRVAGNTISETERVSMVAMADLKAIADCMIASGYGKECVKVYIVMRKSIVDEALYHLGVERLSFSQIQKMDWEVIELKIKTWLNAVKVAVGTLFHGERILCDDVFASAGKRIAESCFAEITKEGAILLFTFPEMVGKCKKTPEKMFRTLDLYEAISDHFQQIQSIFSFESTSNVRLQAVTSMTKLAEAVKTMLTDFESAIQKDSSKKPITGGGVHPLTRYVMNYITFLADYSGVLSDIIFDLPQSPLPESYYQSPMRGENQSSSDISEKIAWLILVLLCKHDGKAELYKDVALSYLFLANNMQYVVVKVRRSNLGFLLGEDWLTNHELKVKEYVSKFVRVGWNKVLSTLPENSTVDMPVEKVRESFVKFNAAFEEECRKQSSWVVTDPKLRDEIKGAIGSKLVAKYGGFYEMNRVGLESVIRYDLENVEGCLCNILYGVGDSGSVSSHSSTSRASSSHGSSRG 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g01791 620 MobiDBLite consensus disorder prediction 1 26 - -
Trre8g01791 620 SUPERFAMILY Cullin repeat-like 47 590 IPR016159 -
Trre8g01791 620 Gene3D Exocyst complex component Exo70 45 598 - -
Trre8g01791 620 Pfam Exo70 exocyst complex subunit 238 589 IPR046364 GO:0000145|GO:0005546|GO:0006887
Trre8g01791 620 MobiDBLite consensus disorder prediction 600 620 - -
Trre8g01791 620 PANTHER EXOCYST COMPLEX PROTEIN EXO70 31 589 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g01791 Trre-Chr8 14245300 14247162 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g01791 22 595 EXO70 exocyst subunit family AT5G59730 50.083 0.0 545
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g01791 K07195 - gmx:100810579 837.795