Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g01779 ATGTCATCAGATGCTTGGAGTGTGTATCCTAAATCACTTTGTCGGAATCGCTTCGTCTTGCATCTCCAGAATCGCTTCTCGGAATCGCTTTCTCTCAGCACCTTTGATTCGTCCGAATCTCTTCCTCACATCATCTCAGAATCACATCCTAATTCACTCAAAATCGCTTTCTCGCACCAATTGGCTTCATCTGAATCGCTTCCCCAAAACCTAGAGACTATTAAGTTACTTCTCGCGCCTATTTTCTCTAATCTGGTATCGAGGCATAAAAAGGGGGCACAAATATTGTCTGCTTTAAATGTTTTCTTGATTATAGGAATTGGAAATGAAGAGAAGATAAAGGAAAGATCACAACTAGCTTATGAGAGAAAGAAGCTGGTCAATAAATTGAAGGCGAAAGTGGAGAAGATTGTGGACGAGAAGCTTGGTTCCCAATTTGAAGTTGGTGTTTCTTGGAAGACATATTCAATATATCACAATAATAAACCTCCTGGAGTGAGATGGTATGATGTTGCAAGTCTTACTGAAGCAAAAAGGCTTTTAGAAGAAGCTATTGTGCTTGAACATTCCCTTTATGGATACCTGAATATTTCAGGGCTTCTGGAGTGCATGAATCATCTAAAAGGGTCAAGTCCGAACTTCTTGTTCAGCTCAAAACTAGTAATGGTCTTGGATGTTACTAACTTCCCATGCGACATTGATGAGGCACTAAGGAGAAGGCTGGAAAAGAGAATATATATTCCACTTCCAAATTTTGAGAGTCGTAAAGAGTTGATTCGGATAAGTTTGAAAACTGTTGAGGTGAAAACTTCATTCTTGGATTAG 825 0.3939 MSSDAWSVYPKSLCRNRFVLHLQNRFSESLSLSTFDSSESLPHIISESHPNSLKIAFSHQLASSESLPQNLETIKLLLAPIFSNLVSRHKKGAQILSALNVFLIIGIGNEEKIKERSQLAYERKKLVNKLKAKVEKIVDEKLGSQFEVGVSWKTYSIYHNNKPPGVRWYDVASLTEAKRLLEEAIVLEHSLYGYLNISGLLECMNHLKGSSPNFLFSSKLVMVLDVTNFPCDIDEALRRRLEKRIYIPLPNFESRKELIRISLKTVEVKTSFLD 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g01779 274 Gene3D - 109 152 - -
Trre8g01779 274 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 198 267 IPR027417 -
Trre8g01779 274 Gene3D - 250 270 - -
Trre8g01779 274 Gene3D - 217 249 IPR027417 -
Trre8g01779 274 PANTHER AAA DOMAIN-CONTAINING 203 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g01779 Trre-Chr8 14127468 14131869 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g01779 110 148 Cytoplasmic Ribosomal Protein Gene Family AT4G13170 61.538 2.16e-08 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g01779 K07767 - csin:114308352 95.1301