Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g01773 ATGTTGGATTATAGACAAGGTTGGTTATTTATATTTATATGTGTTTTACCAATTTTTCCTTTGGTGTGTTTTTCTACAACCTTTGTTCCTATAGACAATTACCTTATAGATTGTGGATCATATACAAATACTTCAATAGGTAATCTAAATTTCACATCAGATAATTTCTTTCATAATTTCCTTTCCACACATGAAGATATTCTTGCAAATACTTCTTTAAAATCAACCACTGATTATTCACCTCTTTATCAAACTGCAAGAATCTTCAATTCACCTTCAAAGTACACATTTCCTGTTAACAAAAAGGGTCGGCACTGGATTCGTCTTTATTTCTTTCCATTTATGTATCAGAATTATAATCTTAGTGCTGCAAATTTTGCTGTTACCACTCAAAACAATGTTCTTCTTAGTAACTTTAGTGTGCCGAAAAAAGATCATGTTATGAAGGAGTATTTAGTAAATGTCACCTTAGACACCCTTGTCATAACCTTTATCCCGTCGAATAATTCTATAGCTTTTGTGAGTGCAATTGAAGTTGTTTCTGTACCTGATGAGCTAATTGCCGATGATGCTATTGCATTGAATCCGCGGAGAGAGTATTCGGGATTGTTGACAATGGCACTCGAGACTGTTTTTAGGGTTAACATGGGTGGTCCAAGTGTTTCCTTAGGTGGTGACCCGCTACATCGAACTTGGGTTCCCGATACAAGCTTTCTTATACAACCGAACCTTGGTAGTAATTTTTCGAGTATAGGTGCTGTTAAATATGTAAAAGGGGGTCCAACAGAAAATATTGCTCCGCCTAGTGTCTATGGTACTTTAACAGAGATGAACTCGGATAGTGATCCGCGTAGTAAATTCAATGTGACGTGGAAGTTTAATGTGGAACCGGAATTTCAATACCTTGTGCGACTTCACTTCTGTGATGTAGTCAGTAAAAGTCTTAATGAACTCTATTTTAATGTTTACATTGATTCCTTGTTGGCTGCCAAGGAACTTGATCTCAGTGGAAAGACTAATAATGTGTTGGCTACTCCGTTTTTTATGGATTTTGTTATGGAACCATATGTCGACGATAAAATTCTTGTGAGTATTGGCCCTTCTGATGTAAATAATGACTATCCTAATGCCATTTTGAATGGGCTAGAGATAATGAAAATGAACAACTCTAAGAGCAGTCTCAGTGCATCAACGGCCGTGTTTTTGAGCAGTAATCATGGTTCAAATTCTAAGAAAGTTGGTCTGATCGTCGGTGTGAGTCTTGGTATATTTTGTGTGGTGATGGCATTGGTCGGAGTTTTCTTTGTACTCGGCAGGAGAAGAAGACGGTTGACACAACAAGGGGATTCAAAGACATGGGTTCCTTTATCGATCTACGATGGAACTTCTCACACAATGGGAAGTAAAGATTCGAAAGGCACAGTAACAAGTGCTGCTTCAAACTTCGGATATCGCTTCCCTTTTGTTGCAGTTCAAGAGGCCACAAATAATTTTGATGAGAGTTGGGTTATTGGTATAGGTGGTTTCGGTAAGGTATACAAAGGTGAATTGAACGATGGAACTAAAGTTGCTTGTAAGAGGGGGAACCCTCGGTCCCACCAGGGACTTGCAGAGTTCCGAACCGAAATCGAAATGTTGTCTCAATTTCGCCATCGCCATTTGGTATCATTGATTGGATATTGTGACGAAAGGAATGAAATGATCTTGATATATGAGTACATGGAGAACGGAACTGTTAAAAGTCATCTGTACGGTTCAGGTCTCCCCAGCTTAAGTTGGAAGGACCGGCTCGAGATATGCATTGGAGCAGCTAGGGGACTTCATTACCTTCATACCGGCTATGCTAAAGCAGTTATTCACCGTGATGTAAAGTCGGCAAATATCTTACTTGACGAGAATCTCATGGCAAAAGTGGCCGATTTCGGACTATCAAAGACAGGACCGGAAATCGATCAGACACACGTGAGCACAGCTGTCAAAGGGAGTTTTGGTTATCTTGATCCCGAATATTTTAGAAGGCAACAGTTAACAGAAAAATCAGACGTCTATTCATTTGGTGTAGTTTTGCTTGAGGTTTTGTGTGCAAGACCTGTTATAGACCCATCTCTTCCTAGAGAAATGGTGAACTTGGCAGAATGGGCGATGAAATGGCAGAAAAGAGGGGAACTCGCGCGAATCGTAGATCCAACACTTGCTGGGAAAATCAGACCGGACTCTCTTAGAAAGTTTGGAGAGACTGCTGAAAAATGTTTGGCTGATTTTGGTGTCGATAGGCCTTCAATGGGAGATGTATTGTGGAATTTGGAGTATGCTCTTCAACTGCAAGAGGCTGTTGTTCAAGGCGATCCTGATGAAAACAGTACTAATATGATCGGTGAACTATCTCCACAAATAAACAATTTCGACCACGAATCAGGCGTTTCTGTCGCGCAATTTGAACCTTCGAGTCTCGACGATCTTTCAGGTGTTTCTATGAGTAAAGTGTTCTCACAGTTAGTGAAATCTGAGGGAAGATGA 2517 0.3997 MLDYRQGWLFIFICVLPIFPLVCFSTTFVPIDNYLIDCGSYTNTSIGNLNFTSDNFFHNFLSTHEDILANTSLKSTTDYSPLYQTARIFNSPSKYTFPVNKKGRHWIRLYFFPFMYQNYNLSAANFAVTTQNNVLLSNFSVPKKDHVMKEYLVNVTLDTLVITFIPSNNSIAFVSAIEVVSVPDELIADDAIALNPRREYSGLLTMALETVFRVNMGGPSVSLGGDPLHRTWVPDTSFLIQPNLGSNFSSIGAVKYVKGGPTENIAPPSVYGTLTEMNSDSDPRSKFNVTWKFNVEPEFQYLVRLHFCDVVSKSLNELYFNVYIDSLLAAKELDLSGKTNNVLATPFFMDFVMEPYVDDKILVSIGPSDVNNDYPNAILNGLEIMKMNNSKSSLSASTAVFLSSNHGSNSKKVGLIVGVSLGIFCVVMALVGVFFVLGRRRRRLTQQGDSKTWVPLSIYDGTSHTMGSKDSKGTVTSAASNFGYRFPFVAVQEATNNFDESWVIGIGGFGKVYKGELNDGTKVACKRGNPRSHQGLAEFRTEIEMLSQFRHRHLVSLIGYCDERNEMILIYEYMENGTVKSHLYGSGLPSLSWKDRLEICIGAARGLHYLHTGYAKAVIHRDVKSANILLDENLMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLLEVLCARPVIDPSLPREMVNLAEWAMKWQKRGELARIVDPTLAGKIRPDSLRKFGETAEKCLADFGVDRPSMGDVLWNLEYALQLQEAVVQGDPDENSTNMIGELSPQINNFDHESGVSVAQFEPSSLDDLSGVSMSKVFSQLVKSEGR 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g01773 838 FunFam Putative receptor-like protein kinase 33 183 - -
Trre8g01773 838 FunFam receptor-like protein kinase FERONIA 462 573 - -
Trre8g01773 838 ProSitePatterns Protein kinases ATP-binding region signature. 504 526 IPR017441 GO:0005524
Trre8g01773 838 Gene3D Phosphorylase Kinase; domain 1 460 573 - -
Trre8g01773 838 ProSiteProfiles Protein kinase domain profile. 498 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g01773 838 ProSitePatterns Serine/Threonine protein kinases active-site signature. 618 630 IPR008271 GO:0004672|GO:0006468
Trre8g01773 838 FunFam Receptor-like protein kinase FERONIA 207 389 - -
Trre8g01773 838 Pfam Malectin-like domain 36 387 IPR024788 -
Trre8g01773 838 Gene3D - 33 182 - -
Trre8g01773 838 Gene3D - 206 389 - -
Trre8g01773 838 Pfam Protein tyrosine and serine/threonine kinase 503 694 IPR001245 GO:0004672|GO:0006468
Trre8g01773 838 CDD STKc_IRAK 504 769 - -
Trre8g01773 838 SMART serkin_6 498 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g01773 838 FunFam Receptor-like protein kinase FERONIA 574 789 - -
Trre8g01773 838 SUPERFAMILY Protein kinase-like (PK-like) 477 769 IPR011009 -
Trre8g01773 838 PANTHER OS07G0166700 PROTEIN 485 775 IPR045272 GO:0004714|GO:0006468
Trre8g01773 838 Gene3D Transferase(Phosphotransferase) domain 1 574 791 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g01773 Trre-Chr8 14057556 14060072 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g01773 12 838 Receptor kinase-like Gene Family AT3G46290 64.748 0.0 1063
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Trre8g01773 Malectin_like 3.5e-40 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g01773 - - gmx:100806488 1338.94