Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g01771 ATGCAGCAGCAGCACAGCCAACTCGGCGAGTATGACTCAGTCACACAACCCAACTTAGAGGTGAGTTACAGTAATGGTGGTGGTGGTGGCGGCAGCAGCGGGTGCAGCAGCTACATGGGATCACCGAGTAATTACGAGGAACAGTTGATGCAGAGGAGCATTAGTCACTCGCTACAAAAGAATGATGGGCACCACCACCATCATCAACACCTTTTTCCATATCTGTTTTCTGAATTGCTTGACACTGAGAATGGTCCGGTGCGACGAGTTTATAGTACCGGTGATCTTGATCAGAGAGTTAATGGATTGCAACAACATTTCCATCATCAATCAGATAGTCCTTTGTCAACAGAGAGTAACATGATAATAGAAGAAATGAGCAGAGTAGCTTGTCCTTATAGCCCGGAAGAAAAGAAGGTCAGGATTGAGAGATATAAAAGCAAGAGAAACCAGAGGAATTACAACAAAAAAATTAAGTATGTTTGCAGGAAGACATTGGCAGACAATAGGCCACGTATTAGGGGAAGATTTGCAAAGAATGATGAAATTGTGATGAAGCCTCCAAATCAATATTGGAGCCATATTAGTAATAATGGAGATGAAATATTAGAAGATGAGGAAGATGAAAATTGGGACAATTTATTTGATTCATTGGTTCCTACTTCAAATCTTGCTCATGAGGAGGAGCCTCAACATAGTTCCTCCTTTGGTATGTTATATTAA 723 0.4136 MQQQHSQLGEYDSVTQPNLEVSYSNGGGGGGSSGCSSYMGSPSNYEEQLMQRSISHSLQKNDGHHHHHQHLFPYLFSELLDTENGPVRRVYSTGDLDQRVNGLQQHFHHQSDSPLSTESNMIIEEMSRVACPYSPEEKKVRIERYKSKRNQRNYNKKIKYVCRKTLADNRPRIRGRFAKNDEIVMKPPNQYWSHISNNGDEILEDEEDENWDNLFDSLVPTSNLAHEEEPQHSSSFGMLY 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g01771 240 Pfam CCT motif 140 180 IPR010402 GO:0005515
Trre8g01771 240 ProSiteProfiles CCT domain profile. 138 180 IPR010402 GO:0005515
Trre8g01771 240 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 15 198 IPR045281 GO:0009909
Trre8g01771 240 MobiDBLite consensus disorder prediction 1 43 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g01771 Trre-Chr8 14044352 14049677 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g01771 134 183 C2C2-CO-like Transcription Factor Family AT5G15850 44.000 3.77e-10 57.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Trre8g01771 CCT 6e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g01771 - - aprc:113859774 256.914