Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g01770 ATGTATACAAACTTCAACCTTACATTCTCACGCGCCACTGATACCCACTCCCATTTTCCGTCGCCAATGCAGCAGCAGCACAGCCAACTCGGCGAGTATGACTCAGTCACACAACCCAACTTAGAGGTGAGTTACAGTAATGGTGGTGGTGGTGGCGGCAGCAGCGGGTGCAGCAGCTACATGGGATCACCGAGTAATTACGAGGAACAGTTGATGCAGAGGAGCATTAGTCACTCGCTACAAAAGAATGATGGGCACCACCACCATCATCAACACCTTTTTCCATATCTGTTTTCTGAATTGCTTGACACTGAGAATGGTCCGGTGCGACGAGTTTATAGTACCGGTGATCTTGATCAGAGAGTTAATGGATTGCAACAACATTTCCATCATCAATCAGATAGTCCTTTGTCAACAGAGAGTAACATGATAATAGAAGAAATGAGCAGAGTAGCTTGTCCTTATAGCCCGGAAGAAAAGAAGGTCAGGATTGAGAGATATAAAAGCAAGAGAAACCAGAGGAATTACAACAAAAAAATTAAGTATGTTTGCAGGAAGACATTGGCAGACAATAGGCCACGTATTAGGGGAAGATTTGCAAAGAATGATGAAATTGTGATGAAGCCTCCAAATCAATATTGGAGCCATATTAGTAATAATGGAGATGAAATATTAGAAGATGAGGAAGATGAAAATTGGGACAATTTATTTGATTCATTGGTTCCTACTTCAAATCTTGCTCATGAGGAGGAGCCTCAACATAGTTCCTCCTTTGGTATGTTATATTAA 789 0.4183 MYTNFNLTFSRATDTHSHFPSPMQQQHSQLGEYDSVTQPNLEVSYSNGGGGGGSSGCSSYMGSPSNYEEQLMQRSISHSLQKNDGHHHHHQHLFPYLFSELLDTENGPVRRVYSTGDLDQRVNGLQQHFHHQSDSPLSTESNMIIEEMSRVACPYSPEEKKVRIERYKSKRNQRNYNKKIKYVCRKTLADNRPRIRGRFAKNDEIVMKPPNQYWSHISNNGDEILEDEEDENWDNLFDSLVPTSNLAHEEEPQHSSSFGMLY 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g01770 262 Pfam CCT motif 162 202 IPR010402 GO:0005515
Trre8g01770 262 MobiDBLite consensus disorder prediction 43 62 - -
Trre8g01770 262 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 20 220 IPR045281 GO:0009909
Trre8g01770 262 ProSiteProfiles CCT domain profile. 160 202 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g01770 Trre-Chr8 14044286 14049677 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g01770 156 205 C2C2-CO-like Transcription Factor Family AT5G15850 44.000 4.36e-10 57.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Trre8g01770 CCT 6.9e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g01770 - - aprc:113859774 270.396