Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g01765 ATGGAAGCATTTACAAGAGATCATCGAGGTTCACTTGAAGTCTTCAATCCATCTTCATCTGACATCGACAACAATAACGAGAATCCGAATCCGAATTTGAATTCGAATCTAAATTCAGTCAATTCATGGAACAATTGGACGACAAACTCACGCGCCAATGAAACTGCACAACAACAAACGCGCGATTCAATTAACTTCGATGAAGTCACCGTTGCAACTTCCTGGATGGCGCTGAAGGAAACAACTCCTCCACCGTCAATTTCCGGCGAAACCGGCTCCGCTGCGGCGCAAAGAGCAGCGGAATGGGGATTAGTACTGAAAACTAATTCGGAAACAGGAAAACCACAGGGAGTAGCAGTTAGAAGCTCCGGTGGTGGTTCGAGAAGAGACTCGAATAATTCGGTGAGAAGCTCCGGTGAGAGTTCCGATGACGGAAGAGGAATACCGAGAGTTTCGGAGGATTTGAGAGATGCATTATCGGCATTTCAACAAACATTTGTTGTTTCGGATGCTACCAAACCCGATTACCCGATTATGTATGCTAGTGCCGGGTTTTTTAATATGACGGGTTATACTTCTAAAGAGGTCATTGGAAGAAATTGTCGATTTATGCAGGGAGCTGATACGGATCCGAATGATGTGGCAAAGATAAGAGAAGCTTTAGCAGCGGGGACGACTTATTGTGGAAGGTTACTAAATTACAAGAAGGATGGGACACCCTTTTGGAACCTTCTTACTATTGCTCCCATCAAGGACGAACATGGCAAAATCCTCAAACTTATTGGAATGCAAGTAGAGGTTAGCAAGCATACAGAGGGGACCAAGGAGAAGATGCTACGTCCCAATGGATTGCCTGAATCCTTGATTCGATATGATGCTCGTCAGAAAGAGAAGGCAAATTCATCAGTAAGTGAGTTGGTGGAAGCAGTGAGCAAAAGACCACGGTCACTTAGTGAATCAACAAACCATCTTCCCTTCATCAAAACCCCAAAAAGTGTACTACGTGGTGGTGGTGGTAATAATGATCATGCAACAAAACTACATAAAAAATTATCTAATTCCTCAAGGAGAAAATCTGAGAGTACTTTACCTTCATTTAGACGTAAATCACATTCTGGATCAGGAGTTGACACTTTTAATTCAATGCATTCCATCAATGAGCTCCCTGAAAACAAAAACAACTCGCGTCGCCGTTCTTTCATGGGGTTGATCAGGAAAAGTCAATCAAACAATGAAAGCTTCAATGATGATGAACAAGTTATTGATGAGGATAGCTCTGAGGATGATCAAAGGTCTGATAGTTTTGACGACAAAATCACAAAAAAGAGAGAAAAAAGAAAGGGTCTTGATCTTGCTACCACGCTTGAACGTATCGAAAAGAACTTCGTCATTACTGATCCAAGGCTTCCTGATAACCCTATTATCTTTGCATCTGATAGCTTCTTAGAGCTTACAGAGTATTCTCGTGAAGAAATATTAGGAAGAAATTGCAGGTTTCTGCAAGGACCTGAAACAGATCCTGCAACAGTGAAAAAAATTAGACATGCTATTGACAATCAAACAGAAGTTACTGTGCAGCTTATTAATTATACAAAGAGTGGTAAAAAGTTTTGGAACTTATTTCATTTGCAGCCAATGCGTGATCAGAAGGGAGAGGTACAATATTTTATTGGAGTTCAACTTGATGGTAGTCAACATGTGGAGCCTCTTCACAACCGCATTGCAGATGATACAGCAAAAGAGGGAGAAAATTTGGTAAAAAAAACTGCAGAAAATGTAGATGATGCATTGAGAGAACTACCAGATGCTAATATGAAACCAGAAGATCTATGGATGAATCACTCAAAAGTGGTTCTCCCTAAACCTCATAGGAGGGATGATGTTGCTTGGAAAGCTATTCAGAAGATCATGGAGAATGGGGAGCAAATAGGATTGAAGCATTTTAAGCCAATTAAACCTTTAGGGTCAGGCGACACCGGAAGTGTCCATCTGGTGGAGCTATGTGGAACTAATCAACAGTTCGCCATGAAGGCTATGGAGAAGAATGTTATGCTCAATCGAAATAAGGTGCATAGAGCTTGCACAGAGAGAGAAATCCTAGACATGTTGGATCACCCTTTTCTTCCTGCATTATATGCTTCATTTCAGACCAAAACACATATTTGTTTGATAACTGATTACTGTCCTGGTGGAGAACTATTCTTGCTTCTTGAGCGCCAGCCAGCAAAGGTTCTCAAGGAAGATGCAGTGAGATTTTATACTTCTGAAGTAGTTGTTGCATTGGAGTACCTTCATTGTCAAGGTATAATATATCGAGATTTGAAGCCAGAAAATGTGTTACTACAAAGCAGTGGACATGTGGCTCTAACAGATTTTGATTTGTCATGTTTAACATCTTGTAAACCACAGCTTTTGATTCCAACTACAAATAACAAGAAGAAAGGCCAACAAGCTCCAATATTTATGGCTGAACCAATGAGAGCATCAAACTCTTTTGTTGGCACAGAAGAATACATAGCACCGGAAATTATAACTGGTTCTGGCCATACTAGTGCTGTTGATTGGTGGGCTCTTGGAATTCTTCTCTATGAAATGTTTTATGGATATACACCATTTAGAGGAAAGAATAGGCAAAGAACATTTTCAAATATTCTCCACAAGGATCTTAAATTTCCCAAAAGTAAACAGATAAGTCTCGGTGCAAAACAATTGATTTATCACTTGTTGCAAAGAGATCCAAGTAGCAGATTGGGTTCAAAGGGAGGAGCAAATGATATTAAAAACCATTCATTCTTCAGAGGTGTCAATTGGGCCCTAGTTAGATGCACGAAACCTCCTGAGCTTGATGCTCCTCTCTTTGATACAAATGGAGAAAAAATGGAAAAAGAAGCCAAATATATAGATAATGGGCAAGAGGATATGAGTGTCTTCTGA 2934 0.4032 MEAFTRDHRGSLEVFNPSSSDIDNNNENPNPNLNSNLNSVNSWNNWTTNSRANETAQQQTRDSINFDEVTVATSWMALKETTPPPSISGETGSAAAQRAAEWGLVLKTNSETGKPQGVAVRSSGGGSRRDSNNSVRSSGESSDDGRGIPRVSEDLRDALSAFQQTFVVSDATKPDYPIMYASAGFFNMTGYTSKEVIGRNCRFMQGADTDPNDVAKIREALAAGTTYCGRLLNYKKDGTPFWNLLTIAPIKDEHGKILKLIGMQVEVSKHTEGTKEKMLRPNGLPESLIRYDARQKEKANSSVSELVEAVSKRPRSLSESTNHLPFIKTPKSVLRGGGGNNDHATKLHKKLSNSSRRKSESTLPSFRRKSHSGSGVDTFNSMHSINELPENKNNSRRRSFMGLIRKSQSNNESFNDDEQVIDEDSSEDDQRSDSFDDKITKKREKRKGLDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVKKIRHAIDNQTEVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSQHVEPLHNRIADDTAKEGENLVKKTAENVDDALRELPDANMKPEDLWMNHSKVVLPKPHRRDDVAWKAIQKIMENGEQIGLKHFKPIKPLGSGDTGSVHLVELCGTNQQFAMKAMEKNVMLNRNKVHRACTEREILDMLDHPFLPALYASFQTKTHICLITDYCPGGELFLLLERQPAKVLKEDAVRFYTSEVVVALEYLHCQGIIYRDLKPENVLLQSSGHVALTDFDLSCLTSCKPQLLIPTTNNKKKGQQAPIFMAEPMRASNSFVGTEEYIAPEIITGSGHTSAVDWWALGILLYEMFYGYTPFRGKNRQRTFSNILHKDLKFPKSKQISLGAKQLIYHLLQRDPSSRLGSKGGANDIKNHSFFRGVNWALVRCTKPPELDAPLFDTNGEKMEKEAKYIDNGQEDMSVF 977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g01765 977 ProSitePatterns Protein kinases ATP-binding region signature. 654 677 IPR017441 GO:0005524
Trre8g01765 977 ProSiteProfiles PAS repeat profile. 447 520 IPR000014 -
Trre8g01765 977 ProSiteProfiles PAC domain profile. 521 575 IPR000700 -
Trre8g01765 977 MobiDBLite consensus disorder prediction 366 415 - -
Trre8g01765 977 ProSiteProfiles Protein kinase domain profile. 648 932 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g01765 977 ProSiteProfiles PAC domain profile. 225 279 IPR000700 -
Trre8g01765 977 Pfam Protein kinase domain 650 932 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g01765 977 FunFam LOV domain-containing protein 647 731 - -
Trre8g01765 977 PANTHER FLIPPASE KINASE 1-RELATED 146 955 - -
Trre8g01765 977 SMART pas_2 449 518 IPR000014 -
Trre8g01765 977 SMART pas_2 153 222 IPR000014 -
Trre8g01765 977 Pfam PAS domain 172 268 IPR000014 -
Trre8g01765 977 Pfam PAS domain 470 562 IPR000014 -
Trre8g01765 977 Gene3D Phosphorylase Kinase; domain 1 647 731 - -
Trre8g01765 977 Gene3D PAS domain 436 600 - -
Trre8g01765 977 MobiDBLite consensus disorder prediction 300 439 - -
Trre8g01765 977 SUPERFAMILY Protein kinase-like (PK-like) 631 951 IPR011009 -
Trre8g01765 977 FunFam Putative LOV domain-containing protein 165 322 - -
Trre8g01765 977 CDD STKc_phototropin_like 646 951 - -
Trre8g01765 977 SMART serkin_6 648 932 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g01765 977 ProSitePatterns Serine/Threonine protein kinases active-site signature. 769 781 IPR008271 GO:0004672|GO:0006468
Trre8g01765 977 ProSiteProfiles PAS repeat profile. 151 221 IPR000014 -
Trre8g01765 977 SUPERFAMILY PYP-like sensor domain (PAS domain) 171 268 IPR035965 -
Trre8g01765 977 SMART pac_2 228 270 IPR001610 -
Trre8g01765 977 SMART pac_2 524 566 IPR001610 -
Trre8g01765 977 MobiDBLite consensus disorder prediction 416 430 - -
Trre8g01765 977 MobiDBLite consensus disorder prediction 125 141 - -
Trre8g01765 977 Gene3D Transferase(Phosphotransferase) domain 1 732 943 - -
Trre8g01765 977 FunFam Putative LOV domain-containing protein 732 944 - -
Trre8g01765 977 FunFam LOV domain-containing protein 436 600 - -
Trre8g01765 977 Coils Coil 579 599 - -
Trre8g01765 977 MobiDBLite consensus disorder prediction 107 150 - -
Trre8g01765 977 NCBIfam PAS domain S-box protein 472 562 IPR000014 -
Trre8g01765 977 NCBIfam PAS domain S-box protein 178 271 IPR000014 -
Trre8g01765 977 MobiDBLite consensus disorder prediction 1 47 - -
Trre8g01765 977 Gene3D PAS domain 165 324 - -
Trre8g01765 977 CDD PAS 462 562 IPR000014 -
Trre8g01765 977 MobiDBLite consensus disorder prediction 12 47 - -
Trre8g01765 977 CDD PAS 178 267 IPR000014 -
Trre8g01765 977 SUPERFAMILY PYP-like sensor domain (PAS domain) 463 562 IPR035965 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g01765 Trre-Chr8 13952895 13963937 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g01765 6 974 AGC Kinase Gene Family AT3G45780 68.096 0.0 1325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Trre8g01765 Pkinase 1.1e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g01765 K20715 - gmx:100804524 1435.62