Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g01761 ATGAACAATAATGTTGGGAAAAAGAGTTTGGTAGAACAAAATCACGTGCTTATTGACAGAAAGAGTCTAAATAATAGAGTAGTTAAGGAAGGGCCAGGCTCAGAATCATCGACTGAAAATGACACAAGATTTAGTAAAGTAACCAAAGATGAAAACAATGGGTTGAAGGGACCGGTTCAAATCCATGAGAGGTTGCAGATTTCGCAACAACCACCACCTCGAAATCCAGTTACATACTGGGAAAAATTTCTCCCTGTTACATCAATAAAAGTTCTGCTGGCGGACGATGATGATTCAACACGCAATGTTGTCTGTGCTCTGTTAAGGAATTGTGGTTATGAAGTCACTGCTGTTTCCAATGGTCTCCAAGCGTGGCAAACTCTAGAAGATCCGGAAAATCACATTGATCTTGTTCTAACAGAGGTAGCTATGCCTGTTGTATCTGGAATAAGTCTTTTGTGCAAGATCATGAGCCACATATCTCTGAAGAATATTCCTGTCATTATGATGTCTTCTCATGATTCTATGGGTATAGTCTTTAAGTGCTTGTCAAAAGGCGCAGCTGATTTTTTAGTGAAACCTATCCGGAGGAACGAACTTAAAAATATCTGGCAACATGTTTGGAGAAGATGCCATAGTTCTAGTGATAGTGGGAGTGAAAGTGGGACAAACACCCGGAAATTTGCAAAGTCAAGAAGCATTTGTGCATATGACAACAATAGTGGTAGCAATGATGAGAATGATTATGGAAGCAGAGGCTTGAGTACTCGAGATGGCAGTGACAAAGGAAGTGGAACTCAGAGTTCATGGACTACAAATCTAGCTCAATCTCATGATACTCCTGATAGCACGTGTGCCCAAGTGGTGTATACAAAGCCTGAAAACAGTAGTAGTGTGCAGGTCCATGCCACAGAAAAAGAGTGCCATGAACCAGTTGATCATCCTGATGAGATTGCAATGGGTAAAGATTTAGCAATGGGAATATCTTTGAACATGCAAGAAAACCATCCACTTGAGGAACTGTCTAACAATCCAATGCATAAAGGGGTTAATAAGATGTCTGATATCGATAAAGGACAGAGTAATGTATGTGAAAAAGTACAACTGGAAGATGACAGTGATAAAACCAGGATGCAGGAAAATCAGGCTATGAATGTTGGTGTTACTGATAGCAGCAGTCCACAGGCTGAAAGCAGAGATTTGAACACTTCAAATGGTTTTTCTGGTTTTGCCAAAACAAAAGCAAGTTGTTGCTTCGAACAGCATCCATCACTTGACCTATCATTAAAAAGGATGGGAGAAGTAAAAGACGCTGAACATGTCACAGGTGATGAAAGTAATGTTTTGAGACATTCAGATCTGTCAGCATTCTCCAAATATAATACAGCTTCTGCTTACCAGGCTCAAACTGGCAATGTAGGAAGCTGTTCCCCGCTAGACAATAGCTCAGTTGCACCAAATACAGAGACAATGCAGAACTTCACATCTCATTCAAATGCCACTCCTCCAAATCAACAGTCTAATGGGAGCAACAACATCAATGACCTGGCTTACACTAATATATGTCTTAGCACCAAACATGAAAATTTTGACAAGAAACCCGAGTCTGCCAGAGGGATTGGCTCTTTTATTTCTTCTGAACTCCAAACCGTGCAAAATAATAGTATCTCTGCATCTCAGAAGAAGACTTCTTCCCAGGAAGAATGTGCCGGAATCATTAAAGGACAGGTGGGAGGCTCTGAGCAAGGATTCCAAGTCGAGCACATTCACCATCAACTTCAACATTGTAATCGCATCGCCCACAAGGCTGCAGAGGATCTCCAATCAGTTCATGATCTCTTACATAAAAGCACGACCAAAGTTGCTCAGCAATGTATGTCATCAAATGTGTTTGGAGGGCCAGAAGAAGGTAATGCTGCGGCAAACTATGGCTTGGATGGAAGTACAGCTGAGAGTGATCATGGGAGCAATGGACAGGGTGGAAGCAACACTTTGACAATCAAAATGACAAATGTGGAAAATGGTGATGCAGCAGGTGGGAGCTTTGGAGTTGGTGGCATTGATAAAATAAACATTGGAAGTGTGTCATATGAAGAACGAATTGCATTGAGAGAGGCTGCCTTGACAAAATTTCGACAAAAGAGAAAAGAAAGATGCTTTGAGAAGAAGGTTAGATATCACAGCAGGAAAAAATTGGCAGACCAGCGGCCACGTGTTAAGGGACAATTTGTCAAACTAATAGTGTCTGACAGTAAAGAAGAGGAAAATAAAGAAAGCGAGGACCTTGTATCTATGGATAATTCTAGTGATGTTCCACAGCAGTACCAATCAAAAAGCTGA 2340 0.4111 MNNNVGKKSLVEQNHVLIDRKSLNNRVVKEGPGSESSTENDTRFSKVTKDENNGLKGPVQIHERLQISQQPPPRNPVTYWEKFLPVTSIKVLLADDDDSTRNVVCALLRNCGYEVTAVSNGLQAWQTLEDPENHIDLVLTEVAMPVVSGISLLCKIMSHISLKNIPVIMMSSHDSMGIVFKCLSKGAADFLVKPIRRNELKNIWQHVWRRCHSSSDSGSESGTNTRKFAKSRSICAYDNNSGSNDENDYGSRGLSTRDGSDKGSGTQSSWTTNLAQSHDTPDSTCAQVVYTKPENSSSVQVHATEKECHEPVDHPDEIAMGKDLAMGISLNMQENHPLEELSNNPMHKGVNKMSDIDKGQSNVCEKVQLEDDSDKTRMQENQAMNVGVTDSSSPQAESRDLNTSNGFSGFAKTKASCCFEQHPSLDLSLKRMGEVKDAEHVTGDESNVLRHSDLSAFSKYNTASAYQAQTGNVGSCSPLDNSSVAPNTETMQNFTSHSNATPPNQQSNGSNNINDLAYTNICLSTKHENFDKKPESARGIGSFISSELQTVQNNSISASQKKTSSQEECAGIIKGQVGGSEQGFQVEHIHHQLQHCNRIAHKAAEDLQSVHDLLHKSTTKVAQQCMSSNVFGGPEEGNAAANYGLDGSTAESDHGSNGQGGSNTLTIKMTNVENGDAAGGSFGVGGIDKINIGSVSYEERIALREAALTKFRQKRKERCFEKKVRYHSRKKLADQRPRVKGQFVKLIVSDSKEEENKESEDLVSMDNSSDVPQQYQSKS 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g01761 779 SMART REC_2 89 204 IPR001789 GO:0000160
Trre8g01761 779 MobiDBLite consensus disorder prediction 750 779 - -
Trre8g01761 779 MobiDBLite consensus disorder prediction 471 512 - -
Trre8g01761 779 MobiDBLite consensus disorder prediction 765 779 - -
Trre8g01761 779 MobiDBLite consensus disorder prediction 750 764 - -
Trre8g01761 779 MobiDBLite consensus disorder prediction 649 664 - -
Trre8g01761 779 ProSiteProfiles Response regulatory domain profile. 90 208 IPR001789 GO:0000160
Trre8g01761 779 PANTHER TWO-COMPONENT RESPONSE REGULATOR 90 379 IPR045279 GO:0009736
Trre8g01761 779 ProSiteProfiles Rhodanese domain profile. 103 134 IPR001763 -
Trre8g01761 779 MobiDBLite consensus disorder prediction 641 664 - -
Trre8g01761 779 MobiDBLite consensus disorder prediction 239 282 - -
Trre8g01761 779 MobiDBLite consensus disorder prediction 22 55 - -
Trre8g01761 779 FunFam Two-component response regulator-like PRR37 89 247 - -
Trre8g01761 779 ProSiteProfiles CCT domain profile. 704 746 IPR010402 GO:0005515
Trre8g01761 779 MobiDBLite consensus disorder prediction 384 404 - -
Trre8g01761 779 Pfam CCT motif 704 745 IPR010402 GO:0005515
Trre8g01761 779 Gene3D - 88 245 - -
Trre8g01761 779 SUPERFAMILY CheY-like 88 215 IPR011006 -
Trre8g01761 779 CDD psREC_PRR 91 194 - -
Trre8g01761 779 Pfam Response regulator receiver domain 91 202 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g01761 Trre-Chr8 13911904 13917031 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g01761 36 464 Response Regulator Gene Family AT5G60100 44.671 3.33e-83 269
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Trre8g01761 Response_reg 1.2e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g01761 K12129 - gmx:100785796 911.753