Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g01755 ATGACAAGCTTTCGAAAGGAATTGATGGAAGTTCCTGATGAGAATGGGAAGCATACCGTTGATGAGAATGAAGAGGAAAATCTCAATGATACCGCTGAAGAGGAAGTTCCTGATGAGAATGGGAAGCATACGGCTGACAATGATTCATGTCATGTTGATTTAGAAGCTAATGTTAGTCAAGAACCATACATTGGAATGAAATTTGATTCACAAGAAAATGCTTATTCATTTTATACACATTATGCTAAGTGTGTCGGATTTGGGATATCAATTAAAAACAGTCGCCGCTCAAAGGTTTCTAGAGAGTTTATTGACGCGATTTATGCTTGCACAAGATACGGGAAGAAGCGAGAATCCACAGCACAAAATCCGCGTCCATGTTTGAAGGCTATTGAATTGCTCGAGGAAGGATCACTAAGCTTTGAGAGTTACGATGTTGCATTCCATGCACTTGAAGAGACCTTGAAACAATGTGCAGCTATCAATAAATCTTTGAAACTCAGCAAGGAAAAAGTTGGTCAAAACAGTTTCCATGAGAAGTCACTACGTGATCCTCAACCATCAAAAACAAAAGGGGCTCCTACAAAAAGAATGAAGAGTGGGATTGAAAAAGGTCGTAAGAGAACATCTAGTGTTAAAGTAAAAAAAGTTTGA 654 0.3853 MTSFRKELMEVPDENGKHTVDENEEENLNDTAEEEVPDENGKHTADNDSCHVDLEANVSQEPYIGMKFDSQENAYSFYTHYAKCVGFGISIKNSRRSKVSREFIDAIYACTRYGKKRESTAQNPRPCLKAIELLEEGSLSFESYDVAFHALEETLKQCAAINKSLKLSKEKVGQNSFHEKSLRDPQPSKTKGAPTKRMKSGIEKGRKRTSSVKVKKV 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g01755 217 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 15 126 - -
Trre8g01755 217 MobiDBLite consensus disorder prediction 172 186 - -
Trre8g01755 217 MobiDBLite consensus disorder prediction 172 217 - -
Trre8g01755 217 MobiDBLite consensus disorder prediction 1 25 - -
Trre8g01755 217 Pfam FAR1 DNA-binding domain 76 122 IPR004330 -
Trre8g01755 217 MobiDBLite consensus disorder prediction 1 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g01755 Trre-Chr8 13863742 13872475 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Trre8g01755 FAR1 3.3e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g01755 - - mtr:120578282 165.236