Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g01734 ATGGATCATTTCACAGAAAAATTACCTCCAATGGATCTCATGCGTTCCGAGAAGATGACCTTCGTTCAACTCATCATTCCCGCCGAGTCCGCTCACCGTTGCATTACCTATTTAGGCCAACTCGGTCTTCTTCAATTTCGCGACTTAAATTCTGAAAAAAGCCCATTCCAGAGGACATTTGTTAACCAGGTAAAGCGATGTGCAGAAATGTCAAGAAAGCTACGGTTCCTCATGGATCAGATCAATAAAGCTGGGATAGTGTCTTCCCTTTCTGTCTTGCAATCAGATACACATTTGGAGGATATAGAGACACAACTTTCTGAGCACGAACACGAGATAATTGAAATAAACTCTAACAGTGAGAAACTTCAGCAATCATATAATGAACTCCTTGAGTTCAAGATTGTACTGCAAAAGGCATGTAGTTTTCTTGTTTCAAGTCATGGCCAGGCCGTTTCAGAAGAGAGAGAACTGGAGGAGAATGTTTACTCAAATGGAGACTTTGTTGAGACACCGTTTTTGTTTGAACAGGAAATTGTGCCTGGAACATCAAAATCAAACGAATCTGGTTTAAGATTTATCAGTGGGATAATTTGTAAATCGAAAGTTCTCAGGTTTGAAAGGATGTTGTTTCGTGCCACAAGAGGCAATATGCTTTTCAATCAGGCACCGGCTGATGAACAAATTATGGATCCTATTTCAAATGAGATGGTTGAGAAGACTGTGTTTGTTGTGTTTTTCTCTGGAGAGCAAGCAAGAACAAAGATTCTGAAAATTTGTGAAGCATTTGGTGCAAATTGTTACCCTGTTCCTGAAGATATAAGTAAACAAACACAAATAACTCGGGAGGTTTCATCACGCCTTGCTGACTTAGAGGCAACTTTGGATGCTGGGATTAGGCATCGGAATAAGGCTCTATCTTCTGTAGGAGGTCATTTAGCAAAATGGATGGACATGGTAAGAAGAGAGAAGGCTGTATATGATACGCTGAACATGTTAAATTTTGATGTCACCAAAAAATGTCTTGTTGCAGAGGGCTGGTGTCCAATATTTGCAAAAACACAGATTCAGGATGCACTGCAACGTGCAACTTTTGACAGCAATTCTCAAGTGGGGGTAATCTTTCATTCAATGGATGCACTGGAATCACCACCAACATATTTTAGGACCAACAATTTCACAAATCCATATCAAGAAATTGTAGATGCATATGGTGTTGCAAGATATCAAGAAGCAAATCCAGCAGTTTACACAACTATTATATTCCCATTTCTTTTTGCGGTGATGTTTGGGGACTGGGGTCATGGAATTTGCCTGCTGCTTGGAGCATTGGTTCTTATAGCACATGAAAGAAAGCTCAGTAATCAGCGACTGGGAAGCTTTATGGAGATGCTATTTGGTGGGCGCTATGTGATTCTTTTGATGTCACTATTTTCAATGTATTGTGGGTTAATCTACAATGAATTCTTCTCGGTTCCTTTTCACATATTTGGTGCGTCTGCTTACAAATGCCGAGATATGTCATGCAGGGATGCGCATACTACTGGCTTAGTAAAATACAGGGAACCATACCCATTTGGTGTGGATCCAAGCTGGCGTGGAAGTCGTTCAGAATTGCCCTTTCTGAATTCTCTCAAGATGAAGATGTCCATTCTGTTTGGTGTGGTGCATATGAACTTAGGAATTATGTTAAGTTACTTCAATGCTCGTTTCTTTGGCAGTTCACTGGATATAAGGTATCAGTTTGTGCCGCAGATGATTTTCCTTAACAGTCTATTTGGGTATCTTTCGCTTCTCATTATTGTCAAGTGGTGTACTGGCTCTCAGGCAGACCTTTATCATATAATGATTTACATGTTTTTAAGCCCCTTTGACAAGCTTGGTGAGAATGAGTTGTTCTGGGGCCAAAGACCACTTCAAATTTTGTTATTGCTTCTGGCTCTAATTGCAGTTCCATGGATGCTCTTTCCAAAGCCTTTTATATTAAAGAAACTTCATAATGAGAGATTTCAAGGACGCAATTACGGTGTTCTTCATACCTCAGAGATAGATCTTGAGGTGGAACCGGATTCTGCCAGGGCCATGCAACATCATGATGAATTTAATTTCAGCGAGGTCTTTGTTCACCAAATGATTCACTCCATTGAGTTTGTTCTGGGCTCTGTTTCAAATACGGCCTCATATCTCCGACTTTGGGCATTAAGCTTGGCTCACTCAGAGCTTTCTACTGTTTTTTACGAGAAAGTTCTGCTACTAGCATGGGGGTATGACAATCTTCTCATTCGGTTAGTGGGACTAGTTGTTTTTGCATTTGCAACTGCTTTTATACTACTTATGATGGAGACTCTGAGCGCTTTTCTTCACGCCCTGCGACTTCATTGGGTTGAATTTCAAAATAAATTTTACCATGGTGATGGCTACAAATTCAGACCTTTTTCCTTTGCCAACTTAGCAGATGATGAAAATTGA 2469 0.403 MDHFTEKLPPMDLMRSEKMTFVQLIIPAESAHRCITYLGQLGLLQFRDLNSEKSPFQRTFVNQVKRCAEMSRKLRFLMDQINKAGIVSSLSVLQSDTHLEDIETQLSEHEHEIIEINSNSEKLQQSYNELLEFKIVLQKACSFLVSSHGQAVSEERELEENVYSNGDFVETPFLFEQEIVPGTSKSNESGLRFISGIICKSKVLRFERMLFRATRGNMLFNQAPADEQIMDPISNEMVEKTVFVVFFSGEQARTKILKICEAFGANCYPVPEDISKQTQITREVSSRLADLEATLDAGIRHRNKALSSVGGHLAKWMDMVRREKAVYDTLNMLNFDVTKKCLVAEGWCPIFAKTQIQDALQRATFDSNSQVGVIFHSMDALESPPTYFRTNNFTNPYQEIVDAYGVARYQEANPAVYTTIIFPFLFAVMFGDWGHGICLLLGALVLIAHERKLSNQRLGSFMEMLFGGRYVILLMSLFSMYCGLIYNEFFSVPFHIFGASAYKCRDMSCRDAHTTGLVKYREPYPFGVDPSWRGSRSELPFLNSLKMKMSILFGVVHMNLGIMLSYFNARFFGSSLDIRYQFVPQMIFLNSLFGYLSLLIIVKWCTGSQADLYHIMIYMFLSPFDKLGENELFWGQRPLQILLLLLALIAVPWMLFPKPFILKKLHNERFQGRNYGVLHTSEIDLEVEPDSARAMQHHDEFNFSEVFVHQMIHSIEFVLGSVSNTASYLRLWALSLAHSELSTVFYEKVLLLAWGYDNLLIRLVGLVVFAFATAFILLMMETLSAFLHALRLHWVEFQNKFYHGDGYKFRPFSFANLADDEN 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g01734 822 Pfam V-type ATPase 116kDa subunit family 37 814 IPR002490 GO:0033179|GO:0046961|GO:1902600
Trre8g01734 822 PIRSF ATP6V0A1 9 822 IPR026028 GO:0000220|GO:0046961
Trre8g01734 822 Coils Coil 99 126 - -
Trre8g01734 822 PANTHER VACUOLAR PROTON ATPASES 13 819 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g01734 Trre-Chr8 13704077 13713726 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g01734 1 815 Primary Pumps ATPases(2) AT2G28520 79.437 0.0 1336
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g01734 K02154 - gmx:100800799 1458.74