Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g01723 ATGGAGATTACTACTAATGACACTTCTTCTCCAACTTCTTCATCTAATTCACCACAATTAATAGCTCAACCTCCTTCTCAAGTTGTTGTTATGAGTCCTTGTGCTGCTTGCAAGATTTTGAGAAGAAGATGTAGTGTTGATAAATGTGTTTTAGCACCTTATTTTCCTCCTACTGATCCTGCTAAGTTTACCATTGCTCATAGAGTTTTTGGTGCTAGCAACATCATCAAATTCTTACAGGAACTTCCAGAAGCTCAAAGAGCTGATGCAGTAACAAGCATGGTTTATGAAGCAAGTGCAAGAGTAAGAGACCCAGTTTATGGTTGTGCAGGAGCAATTTGTCAACTCCAAAAACAAGTCAATGAGCTTCAAGCACAATTAGCCAAAGCACAAGCTGAAGTTGTAAACATGCAACTCCAACAAGCCAATCTTGTAGCTCTAATTTGCATGGAAATGTCACAAAGCCCACAAGAATCACCACAACAAATATCATTGGATAATATTAATAATTTTATTCAAAGTCCTAACCATAATAGTGGCCATCAAATTGGTTTGAACTTCTTTGATGAGAACACTAGTACTCTAAACTCATTGTGGGAACCACTTTGGACATGA 615 0.3756 MEITTNDTSSPTSSSNSPQLIAQPPSQVVVMSPCAACKILRRRCSVDKCVLAPYFPPTDPAKFTIAHRVFGASNIIKFLQELPEAQRADAVTSMVYEASARVRDPVYGCAGAICQLQKQVNELQAQLAKAQAEVVNMQLQQANLVALICMEMSQSPQESPQQISLDNINNFIQSPNHNSGHQIGLNFFDENTSTLNSLWEPLWT 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g01723 204 MobiDBLite consensus disorder prediction 1 21 - -
Trre8g01723 204 ProSiteProfiles LOB domain profile. 32 134 IPR004883 -
Trre8g01723 204 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 32 162 - -
Trre8g01723 204 Pfam Lateral organ boundaries (LOB) domain 33 131 IPR004883 -
Trre8g01723 204 Coils Coil 113 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g01723 Trre-Chr8 13590447 13592655 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g01723 29 204 AS2 family AT2G28500 65.591 6.73e-77 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Trre8g01723 LOB 1.2e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g01723 - - gmx:100819336 280.411