Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g01692 ATGGAAAACTACAGGGATGTTATTCATTCAACTGACAGCGATTCATCGGATGCATCTAGTGCTGAACACAGTGATGATGCTGGATATAGTGATGATGAAGATTGTAACTATGATGTATCCGATGAAGACCAAAGTTCAGATGATGAAGATGTTGCTGATAATTACGATGGCTCTGAAGCAATTGATTCGGAAGAGCCAAATCAGGAAGTACCTGTGGTTGAACATATGGTAAGGATTAATTCCCTTACTGCTGAGGAAATTCGTGGTTTGGAATTTGGAAATTGCGATGAAGCATATGAATTTTACTATCAATACGCTAAATGTAAAGGATTTGCTATTAGGAGAAGCGATATGACAAGAAAGCCCAAAGGTACTGGAATGATAATAATGAATCAGTTTGTCTGCAACAAACGTGGATTCAGAGAACAGAAGCACTTAAATAGGGTAGATAGGCAAAGACGTGACCAACGTCTGAGCCGTACCAACTGCGATGCTAGGATCCGTGTGCACTACAGAGCCGAAAGTCGCAAATATGCAGTCTCATGTTTTGAAGAAACACATAACCATGAATTAACTCCATCTAAATTGGTGCACTTACACCCTGTTTATCGCCGATTAGGAGAAGCGATCTAA 633 0.4013 MENYRDVIHSTDSDSSDASSAEHSDDAGYSDDEDCNYDVSDEDQSSDDEDVADNYDGSEAIDSEEPNQEVPVVEHMVRINSLTAEEIRGLEFGNCDEAYEFYYQYAKCKGFAIRRSDMTRKPKGTGMIIMNQFVCNKRGFREQKHLNRVDRQRRDQRLSRTNCDARIRVHYRAESRKYAVSCFEETHNHELTPSKLVHLHPVYRRLGEAI 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g01692 210 MobiDBLite consensus disorder prediction 1 26 - -
Trre8g01692 210 Pfam FAR1 DNA-binding domain 100 192 IPR004330 -
Trre8g01692 210 MobiDBLite consensus disorder prediction 1 70 - -
Trre8g01692 210 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 14 202 - -
Trre8g01692 210 MobiDBLite consensus disorder prediction 27 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g01692 Trre-Chr8 13324638 13325270 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Trre8g01692 FAR1 4.5e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g01692 - - tpra:123887991 196.052