Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g01641 ATGGAAAACAAGTATCTTCTAGAGTATTGTCAAGAGTATTCTCAGAAGATTACAAGAGAGGTGTTTGGAAGAGGAGAACTTGTTATAGACTCTTCTAAGATAGCTACTAGGTACTTGCATAAGGGCTTTTTCTTGGACTTTATTGCTGCTCTGCCCCTTCCTCAGGTGTTAATTTGGATTATCATACCTAATCTTGGAGAAACCGCATGGGCAGGAGCTGCTTATAACTTGATGCTTTACATGTTGGCTAGTCATGTTTTAGGAGCATGTTGGTATCTTTTGTCAATTGAAAGACAAGAAGCATGTTGGAAAAGTGTCTGCAAAATGGAGGAGTCGTCTTGTAAATATGATTTTTTTGACTGCAACATGGTTAAAGATTCTGTCAGGGCGTCGTGGTTTATAACAAGTAATGTCACAAATTTATGTTCACCAAATGGTCACTTTTATCAGTTTGGTATATATGGTGATGCAGTGACATCCAAAGTTACAACCTCTGCATTCTTTAATAAGTACTTCTTTTGTCTTTGGTGGGGCCTAAGGAATTTGAGTTCTTTGGGACAAAGTCTTCTTACTAGTACTTTTGTTGGAGAAATTATGTTTGCCATTGTTATTGCTACCCTTGGATTGGTTCTTTTCGGATTGCTCATTGGTAATATGCAGACATACCTACAATCAACAACTGCCCGTTCGAAGAGTTCCATTATTTGA 708 0.3785 MENKYLLEYCQEYSQKITREVFGRGELVIDSSKIATRYLHKGFFLDFIAALPLPQVLIWIIIPNLGETAWAGAAYNLMLYMLASHVLGACWYLLSIERQEACWKSVCKMEESSCKYDFFDCNMVKDSVRASWFITSNVTNLCSPNGHFYQFGIYGDAVTSKVTTSAFFNKYFFCLWWGLRNLSSLGQSLLTSTFVGEIMFAIVIATLGLVLFGLLIGNMQTYLQSTTARSKSSII 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g01641 235 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 13 65 - -
Trre8g01641 235 Pfam Ion transport protein 68 230 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Trre8g01641 235 SUPERFAMILY Voltage-gated potassium channels 33 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g01641 Trre-Chr8 12872585 12875300 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g01641 20 229 Ion Channels AT2G28260 61.753 2.35e-106 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g01641 K05391 - gmx:100791992 351.288