Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g01634 ATGGAAACTAGTCTTGTATTTATCTATAACAAAATCATGATTCATCTTTGGTTTATTGCATTGATATGCTTAACTTCATGCTATTCTCAACAACCTTATGACATTACCAATTGTTTTTCAAATGAAACACATCCAGGTTCAAGGTACACGTGCAATTCAACACAAGACACGTGCAAAACATTCTTAGTATATAGAGCCAACCAAAATTTCAAAACCATTTCACAAATCTCAAATCTCTTCAACAAAACTACTAATGAGATTCTTCAAATAAACAACCTTACATCATCATCTCAAATACTCAAACAAGGTAAAGAAGTTCTAATTCCAATCGAATGTACATGTTCTGAACAATTTTACCAAGCAAATTTCAGCTACAAAGTTCTTGAAAACTCAACAACATTTTCAAATATTGCTTGTGAGGTTTTTGAAGGACTAGTGAAACATCTCACACTTTTTGATGAAAATCAATCACAACATGGTAATGAACCAAAAATTGATGATGTTCTTCATGTACCACTTAGATGTACATGTCCAAAAAATAATGTCTCTAGTATTAAAAGGGTAATAAAGTATTTTGCTACATACCCTCTTATACAAGGAGATAATTTTGATATATTGGTTAAGAAATTTGGTTTCTCACTTGATGATTTCTTAGAAGCTAATCAATTACAAACCTTTTCATCAATTTTTCCTAATACAGTTGTTTTAATTCCATTAAGAGATGATGAAAATGGTCCAATCCAAATATTTGATATTCCAGATTCTCCTTCTCCACCACCTAATTTTCTTCCAACAAATCCACTTGAATCACAAGGATCAACACAAACATCAAATTTATATATTGCAGGACCTATCATAGGTTTTGTAATAATCATCATAACATTGATTGCAAGTGGATTCTATATGAAGAAATTAAGAAAAAGTGTTGTTGTTATTGATTCCTTTAATCCAAAAAGTACTTCAAACACTTTGTATTCACCAATGAGAGCTTCTACAACTTCATGTTTATCTCCTGATTTTCTTGTTGGAATAAAGTATTGTTTGCTTAATTACCATATAGAAGAGATAGAGAAAGCAACAAATTTTTTTAGTGATATGAACAAGATTGGTGATTTTGTTTATAAGGGGTTAATCAATGATATTGAAGTGATGGTTAAGAGGTTAAGATTTGAAGATACTAGTGAAGTAATTGATTTACATTCAAGAATTAATCACATTAATATTGTGAATTTAGTTGGTGTTTGTTATGGTGAGGCTAATGATATTTCATGGTCTTATTTAGTTTTTGAATTACCTAAAAATGGTTGTTTAAGGGATTGTTTATTGGATTTGGATCCTTGCAATAGTCTAAGTTGGTATAGAAGGACACAAATAGCATTTGACATAGCAACATGTCTTTACTATTTACATTATTGTTCTTTTCCTTCTTATGCTCATATGAATGTGAATAGTAGAAATATATTTGTGACTGAAAATGGGAGAGGTAAATTAGCAGATGTTGGGGGTGTGTCTAATAATCTTTTGCATGGAATTGTTTCACAAAAGGTTGATATTTTTGCATTTGGTGTTGTTTTACTTGAGTTGATATCAGGAAGAGAAAATTTGGATGGAAAATTGATGAAAGATTGTGTTGGTTTTTTGTTGGGGGAAGGTAGTGAAAGTGGGGGTGGATGTTTTGAAGGGTTGAGGAGTTTTGTGGATCCAAATTTGAAGGAGTATTCTCTTCCTGAGGCTCTTTGTTTGTGTTTTTTAGCTAAGGATTGTGTGAAAGATGATCCATTGCTTAGGCCAACTATGGATGATATCATGAAAGTTCTTGCAAAAATGGTTTAG 1833 0.3126 METSLVFIYNKIMIHLWFIALICLTSCYSQQPYDITNCFSNETHPGSRYTCNSTQDTCKTFLVYRANQNFKTISQISNLFNKTTNEILQINNLTSSSQILKQGKEVLIPIECTCSEQFYQANFSYKVLENSTTFSNIACEVFEGLVKHLTLFDENQSQHGNEPKIDDVLHVPLRCTCPKNNVSSIKRVIKYFATYPLIQGDNFDILVKKFGFSLDDFLEANQLQTFSSIFPNTVVLIPLRDDENGPIQIFDIPDSPSPPPNFLPTNPLESQGSTQTSNLYIAGPIIGFVIIIITLIASGFYMKKLRKSVVVIDSFNPKSTSNTLYSPMRASTTSCLSPDFLVGIKYCLLNYHIEEIEKATNFFSDMNKIGDFVYKGLINDIEVMVKRLRFEDTSEVIDLHSRINHINIVNLVGVCYGEANDISWSYLVFELPKNGCLRDCLLDLDPCNSLSWYRRTQIAFDIATCLYYLHYCSFPSYAHMNVNSRNIFVTENGRGKLADVGGVSNNLLHGIVSQKVDIFAFGVVLLELISGRENLDGKLMKDCVGFLLGEGSESGGGCFEGLRSFVDPNLKEYSLPEALCLCFLAKDCVKDDPLLRPTMDDIMKVLAKMV 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g01634 610 Gene3D Transferase(Phosphotransferase) domain 1 433 505 - -
Trre8g01634 610 Pfam Protein tyrosine and serine/threonine kinase 380 501 IPR001245 GO:0004672|GO:0006468
Trre8g01634 610 Pfam LysM domain 200 238 IPR018392 -
Trre8g01634 610 SUPERFAMILY Protein kinase-like (PK-like) 346 606 IPR011009 -
Trre8g01634 610 Gene3D Phosphorylase Kinase; domain 1 335 430 - -
Trre8g01634 610 ProSiteProfiles LysM domain profile. 193 237 IPR018392 -
Trre8g01634 610 ProSiteProfiles Protein kinase domain profile. 290 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g01634 610 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 16 609 - -
Trre8g01634 610 Gene3D Transferase(Phosphotransferase) domain 1 506 609 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g01634 Trre-Chr8 12787032 12788864 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g01634 15 610 Receptor kinase-like Gene Family AT2G23770 29.513 3.90e-62 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Trre8g01634 PK_Tyr_Ser-Thr 3e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g01634 - - lja:Lj1g3v4047410.1 737.643