Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g01615 ATGACACTAGAAATCAAAAGGGTTATTGTAGGTGGAATTTTGAAGCTCAAGAATAATATTGTGTTCAAAAAGCTTCAAAAGACAATCTTAAAGGGAAGAAATGTTGATAAATCAAGGTATGTGGGAGAGGATGTGAAAAAAGGACATTTTGTTGTGATTGCTGAGGATGAAGAGGGAACAAAGAGATTTGTTGTGCCATTGAGATGTTTAAAAAATCCAATATTTATGAGGTTATTGGAACAAGCAGCTGAAAAATATGGATTTCATGGAGATGGTGCATTGATTGTTCCTTGTAGGCCTAATGAGCTTCAAATGTTATTGGTACAGCAAATGCATGAAGAAGGAAGCTTTTGTTCTAATCAAGTCATTTTTAAATGCTACCAAAGAGGGCCTACTTTACATTTTAATTTAAAGCAAATTATATCTAGAGGTTATTAG 438 0.3333 MTLEIKRVIVGGILKLKNNIVFKKLQKTILKGRNVDKSRYVGEDVKKGHFVVIAEDEEGTKRFVVPLRCLKNPIFMRLLEQAAEKYGFHGDGALIVPCRPNELQMLLVQQMHEEGSFCSNQVIFKCYQRGPTLHFNLKQIISRGY 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g01615 145 Pfam Auxin responsive protein 39 106 IPR003676 GO:0009733
Trre8g01615 145 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 31 106 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g01615 Trre-Chr8 12570615 12571052 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g01615 44 107 Calmodulin-binding Proteins AT3G43120 40.625 6.49e-09 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g01615 - K14488 mtr:25492408 164.851