Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g01610 ATGACAGCAACCTCTACGTTACACTTCCTCTCTCGTTTCCGATTCATCACCAAAACAAAACCTCTCTCTATTCCATCACCTCTTTCAATCCCATTCCATTTCTCCCTCACATCCAAATCAAAGAATCCGACTCGATTTCGATTTTTCTCAATGGCTTCTTCTGCGGAACCCAAGGAGTCACCGGTTAATAACCCTGGTCTTCATACAACTATAGATGAAGCTACTAAGGGTTACTTTATGCAACAAACTATGTTCAGAATCAAAGACCCTAAAGTTAGCCTTGATTTTTATTCCCGCGTTTTGGGCATGTCTTTGCTTAAGAGGTTGGATTTTCCTGAGTTGAAGTTCAGCTTGTACTTTATGGGTTATGAGGATACATCTGAAGCGCCAAGTAACCCTGTTGATAGAACAGTTTGGACCTTTGCTCAAAAGGCTACAATCGAATTGACACATAATTGGGGCACTGAAAGTGATCCAGAGTTCAAAGGGTACCACAATGGCAATTCTGATCCTCGTGGTTTTGGGCACATTGGCATTACTGTTGATGATACCTACAAAGCATGTGAAAGATTTCAGAATCTGGGAGTTGAGTTTGTCAAGAAACCAGATGATGGAAAAATGAAAGGGATAGCCTTCATTAAGGATCCCGATGGGTACTGGATTGAAATCTTTGACAGGAAAACAATAGGAAACGTAACAAGAGGTGCTGCTTAA 714 0.4118 MTATSTLHFLSRFRFITKTKPLSIPSPLSIPFHFSLTSKSKNPTRFRFFSMASSAEPKESPVNNPGLHTTIDEATKGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPELKFSLYFMGYEDTSEAPSNPVDRTVWTFAQKATIELTHNWGTESDPEFKGYHNGNSDPRGFGHIGITVDDTYKACERFQNLGVEFVKKPDDGKMKGIAFIKDPDGYWIEIFDRKTIGNVTRGAA 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g01610 237 NCBIfam lactoylglutathione lyase 80 228 IPR004361 GO:0004462|GO:0046872
Trre8g01610 237 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 68 226 IPR029068 -
Trre8g01610 237 PANTHER LACTOYLGLUTATHIONE LYASE GLYOXALASE I 20 232 - -
Trre8g01610 237 ProSitePatterns Glyoxalase I signature 1. 82 103 IPR018146 GO:0004462|GO:0046872
Trre8g01610 237 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 79 226 IPR037523 -
Trre8g01610 237 CDD GlxI_Zn 80 224 - -
Trre8g01610 237 Gene3D - 54 233 IPR029068 -
Trre8g01610 237 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 82 223 IPR004360 -
Trre8g01610 237 ProSitePatterns Glyoxalase I signature 2. 167 183 IPR018146 GO:0004462|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g01610 Trre-Chr8 12528870 12534985 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g01610 27 237 Calmodulin-binding Proteins AT1G08110 74.537 3.83e-110 314
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g01610 K01759 - gmx:100779383 406.757