Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g01606 ATGGATGTAACAATTGATTATCTATATGCACTTATTGCAGGACTTATATGCATACTCCTAATTTCATACTCTAAATTCATTAGGGGTGGTGAATCACAAACACAACCCAAGCTTCCACCATTAGCCGCTGGTGGGTGGCCGTTAATCGGTCACCTACATCTCTTAGGCAATTCAAATCAACCTCCGTACATAACCTTAGGAAACTTATCCGAAAAATATGGACCGATTTTCGCCCTGAGAATCGGGGTACACAAAGCCGTTATAGTAAGTACTTGGGAGTTAGCAAAAGAGATTTTTACAACTCATGATGTAATAATCTCTTCTCGTCCCAAATTCACTGCTTTCAAAATATTAGGACATAACTATGCTAATTTCGGGTTCTCTCCTTACGGAGAGTATTGGCAAAGGATGCGTAAAATTACGGCTTCCGAGTTGTTATCAACTCGGAGATTCGAATCTCTTCGTGATATTAGACATACAGAAGTGAAGAAATCGTTGATGGAGCTTTATGAGTTAGGTGATGATTTGAAAGTTGAGATGAAAAAGTTTTTAGGAGATATGAATTTGAATGTGATTATGAGAATGATTGCTGGGAAGAGATATTCAGGTGATGAGACAGAGGTGAGAAAAGTGAGATGGGTTTTTAGAGAGTTTTTTAGGTTAACAGGTTTGTTTGTGGTTGGTGATGCAATTCCATTTCTTGGATGGCTTGATCTTGGAGGACATGTGAAGGAAATGAAGAAAGCAGCTATAGAAATGGATAGTGTTGTTTGTGGATGGTTGGAAGAACATCGTAGGAGAAATTATTTGGGGGAGACTAAGATTGAGCAGGATTTCGTTGATGTCTTGTTGAATGTTCTTGATGGTGTTGATCTTGATGGTTATGATGTTGACACTGTCATCAAAGCAACTTGCTTGACGTTAATTGCCGGGGCAACGGACACGACAATGGTAACTATAACTTGGGCACTATCATTATTGTTGAACAACCGCCACACTTTGAAGAAAGTTCAAGATGAATTGGATGAAAAAGTTGGGAAAGAAAGGCTAGTGAATGAATCCGATATAAACAACTTAGTTTACCTTCAAGCAGTGGTGAAAGAGACATTGCGATTATATCCTGCTGGACCACTCTCAGGTGCGCGTCAATTCACTGAAGATTGTACCGTGGGTGGATACCATATCCAAGCCGGAACTCGACTAATTTTAAACCTATGGAAAATGCATAGAGATCCACGTGTATGGTCAGAACCTTTCGAGTTTCAACCCGAGAGGTTCTTAAATACTCATAAGGATGTCGATGTCAAAGGAAAACATTATGAGCTTCTTCCCTTTGGAGGTGGAAGAAGGTCTTGTCCTGGCATAACATTTGGTCTTCAAATGACAAATTTGGCATTAGCTTCTTTCTTGCAAGCATTTGAAGTCACAACTCCATCAAATGCTCATGTTGATATGAGTGCAACATTTGGACTTACAAACATCAAAACCACTCCACTTGATGTTATAGCCAAACCTCGTTTACCATACCATCTTTTTGTTAATGAAAATTAG 1551 0.3926 MDVTIDYLYALIAGLICILLISYSKFIRGGESQTQPKLPPLAAGGWPLIGHLHLLGNSNQPPYITLGNLSEKYGPIFALRIGVHKAVIVSTWELAKEIFTTHDVIISSRPKFTAFKILGHNYANFGFSPYGEYWQRMRKITASELLSTRRFESLRDIRHTEVKKSLMELYELGDDLKVEMKKFLGDMNLNVIMRMIAGKRYSGDETEVRKVRWVFREFFRLTGLFVVGDAIPFLGWLDLGGHVKEMKKAAIEMDSVVCGWLEEHRRRNYLGETKIEQDFVDVLLNVLDGVDLDGYDVDTVIKATCLTLIAGATDTTMVTITWALSLLLNNRHTLKKVQDELDEKVGKERLVNESDINNLVYLQAVVKETLRLYPAGPLSGARQFTEDCTVGGYHIQAGTRLILNLWKMHRDPRVWSEPFEFQPERFLNTHKDVDVKGKHYELLPFGGGRRSCPGITFGLQMTNLALASFLQAFEVTTPSNAHVDMSATFGLTNIKTTPLDVIAKPRLPYHLFVNEN 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g01606 516 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g01606 516 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g01606 516 PRINTS E-class P450 group I signature 187 205 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g01606 516 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g01606 516 PRINTS E-class P450 group I signature 94 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g01606 516 PRINTS E-class P450 group I signature 363 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g01606 516 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g01606 516 PRINTS E-class P450 group I signature 404 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g01606 516 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g01606 516 PANTHER CYTOCHROME P450 82C3-RELATED 17 511 - -
Trre8g01606 516 FunFam Cytochrome P450 82C4 30 504 - -
Trre8g01606 516 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 445 454 IPR017972 GO:0005506|GO:0016705
Trre8g01606 516 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g01606 516 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g01606 516 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g01606 516 Gene3D Cytochrome P450 30 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g01606 516 CDD CYP82 74 506 - -
Trre8g01606 516 SUPERFAMILY Cytochrome P450 45 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g01606 516 Pfam Cytochrome P450 43 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g01606 Trre-Chr8 12471778 12474583 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g01606 40 513 Cytochrome P450 AT4G31940 48.171 1.34e-168 485
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g01606 - - gmx:100810391 734.947