Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g01568 ATGTTGGTAACACCACCATGGCTGGAACAATTATTGTCAACCACATTCTTCTCTGCTTGTAAAGCTCACATCAAGGCACCCAGAAACGAATGCAACATGTATTGCCTTGATTGTAGAGAATCATTCTGTTATTATTGTAGACAAGCTTGGCATAATGATCATCAAGTAATTCAAATAAGGAGGTCGTCTTATCATGATGTTGTGAGGGTAGCTGAGATTCAGAAGGTATTGGATATTAGTGGAGTTCAAACATATGTGATTAATAGTGCTAGAGTGATTTTCCTTAATGAGAGGCCACAAAATCAGATTAAGACAAGTAATGCTGCTATTAGTGGGAGTAAACCAAATTCACATTTGTGTGAAATATGCACAAGATATCTATTGGACCCTTTTCGTTTTTGTTCTTTGGGTTGCAAGCTTGTAGGAATAAAGAAAAATGGGAATGCAAGCTTTGTCTTAAGCGCAAAGAAAGACGAAGAAATAGGGAATATGGATCAAGGAATGTCAAGAAGGTTGCTATCAAAGCAAGAAGACGAAGAAATATTATTATCAATGCGTGAAGGAATCCAAAAACAAGTTTACAAAAGCACGTTTTCTCCTTATTGTTCTAATAATTCATCTCAACAAGCTTGTTCAAATTCAAGGAGAAGAAAGGGAATACCTCATAGGGCACCTTTAGGTCCTTAA 687 0.3654 MLVTPPWLEQLLSTTFFSACKAHIKAPRNECNMYCLDCRESFCYYCRQAWHNDHQVIQIRRSSYHDVVRVAEIQKVLDISGVQTYVINSARVIFLNERPQNQIKTSNAAISGSKPNSHLCEICTRYLLDPFRFCSLGCKLVGIKKNGNASFVLSAKKDEEIGNMDQGMSRRLLSKQEDEEILLSMREGIQKQVYKSTFSPYCSNNSSQQACSNSRRRKGIPHRAPLGP 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g01568 228 MobiDBLite consensus disorder prediction 205 228 - -
Trre8g01568 228 Pfam PLATZ transcription factor 60 140 IPR006734 -
Trre8g01568 228 ProSiteProfiles Zinc finger B-box type profile. 20 59 IPR000315 GO:0008270
Trre8g01568 228 SUPERFAMILY B-box zinc-binding domain 27 61 - -
Trre8g01568 228 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 5 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g01568 Trre-Chr8 12096321 12098121 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Trre8g01568 PLATZ 3.1e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g01568 - - gmx:100787414 337.806