Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g01553 ATGGCGTCAGAGGTTTTGTCTCTCTGTGTGTTGAATTTTAGTGCATGCTTTTTACTACCAAGTCTAAGTGTGCATCGCGTCAGAGGTTCTGTCTCTTTTTGTGTGTTAGATTTTAGGATTATAATGGATAAAACTAATGGGAGATCGAGAGGTCATCCTAAGAAACGAAGAAAGGAGGACGAAAAGGAATGGAAAACAGTTGCTGATGCCAAAAGGCAACCGTTGGAGGCCAAACCAATAACATTGGTTGGTAGGTATGTGCTGAAGGAGTTCCCGGGAAATGGGATTTTTCTGGGTAAAGTTATCTACTATGACACTGGTTTGTGTAAGGTGAATTATGAAGATGGTGATTTCGAAGATTTGGAAAGCGGTGAAATCCGTCCAATACTTATCAGGGATGATGATTTTGATGCTGGTTTAGCCAAGAGGAGGACTAAGCTGGAGAAAGTAATGGCCAAGAATAGTGCCAAGGCTGCAGATGTAGCTGAGAAGGTTTCAGGGAAATCTGGTAAGGAGGAATCTGCTGTTGGTGTGACTGCTCCGAGTGATTTGAACGGAGAATTGTCAATTGAAAATGATAAGGATGAAGATGATGGAGCAGATGCTGATATTTCAAGTGAATCTGTTTCTGATGTTGAGACAGTACCTTTGTCGTCGTCGTTGCAGTTGTCGTTGTCATCGGGAACTATTGGTGTGCTAGAGTCGGGTGTCTCCCATCTTTTTTGTCTATGGATTCTTAAGATCATTCAGCACTCAATTGTTTCTCATCCCTTTACGTTAGATGAGTTTGTTGGGTCTCTGAATTGTCAAGTCTCTAATATGTTGGTTGATGCTATTCAGTTTTCTCTAATGCGGGTGTTAAGGTAA 867 0.4164 MASEVLSLCVLNFSACFLLPSLSVHRVRGSVSFCVLDFRIIMDKTNGRSRGHPKKRRKEDEKEWKTVADAKRQPLEAKPITLVGRYVLKEFPGNGIFLGKVIYYDTGLCKVNYEDGDFEDLESGEIRPILIRDDDFDAGLAKRRTKLEKVMAKNSAKAADVAEKVSGKSGKEESAVGVTAPSDLNGELSIENDKDEDDGADADISSESVSDVETVPLSSSLQLSLSSGTIGVLESGVSHLFCLWILKIIQHSIVSHPFTLDEFVGSLNCQVSNMLVDAIQFSLMRVLR 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g01553 288 MobiDBLite consensus disorder prediction 170 206 - -
Trre8g01553 288 MobiDBLite consensus disorder prediction 190 204 - -
Trre8g01553 288 PANTHER PHD FINGER FAMILY PROTEIN 77 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g01553 Trre-Chr8 11957942 11958808 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g01553 70 288 PHD Transcription Factor Family AT5G35210 34.914 1.86e-25 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g01553 - - tpra:123920021 329.331