Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g01534 ATGGAAAATCACAAGACACCATTTTCCCTATGTCTTGATACCAAGGATGTTGTGATTGTTAAACCCTCCAAGCCCACACCTTTAGAAATTCTTTCCCTCTCCACCATTGACAATGATCCTAACATCAACATTCTTTGCCAAACCATTTATGTCTACAAAGCAAATCATGATTTCACAAATGACCAAAAAGACCCTGCATGTGTAATCAAAGAAGCACTCTCAAAGGCTTTAGTTTACTATTATCCTCTTGCAGGCAAGATAACAACACTTGATGATGAAAAACTTGGAATCAACTGCAACGGCGACGGAGTTCCATTCTTAGAATCAAATGCTAATTGTGAACTCTCTTCTCTTCATTATCTTGAAGGGATTGATGTTCCAACAGCACAAAAACTTGTGTTTGATAACCCTTCACAAGACCAAACTAGTCCTCATCCTTTGGTTTTTAAGGTGACAAAGTTTCTTTGTGGTGGTTTCACAATTGGAATGGGATTGTCACATAGTGTTTGTGATGGTTTTGGTGCATCAAAATTCTATAGAGCACTTGTTGAACTTGCAAGTGGAAAAAATGAACCTACTTTGAAACCTATTTGGGAGAGAGAGAGACTAATAGGGAAAAGTGATCTTAAGGAAGAACCATTCAAATTTCTTATAGATAAAACATCATTAGCAACTTCACCTTTTTTACCAACAAAAGAAATTTCACATGAATGTTTTAGCTTAAATGGTGACACTATAAAAATGCTAAAAATGAAACTAATGAAGGAAAGTGGTGATGATAATATGATGAAAGAAAGTTTCACAACACTTGAAACACTTGGTGCATATGTTTGGAGATCAAAAGTTAGAGCATTGAAATTGAACAATGATGGAAAAACTATGTTTTGTTTAGCAATAGGTGTGAGAAAATTATTGGATCCACCTTTGCATGAAGGGTATTATGGTAATGCTTTTGTAGCTTCAAATGTTATATTAAAAGTGAAAGAGCTTAATGAAAAACCACTTTTTGAAGTTGTGAAGCTTATCAAAGAGAGTAAAAAAGTTGCTTCAAATAATGAATATATAAGAAATTCAATTAACATGTTGGAGACAATGAGGAAAGGGAAGATTAAGATTGAAGGAACGGGTGCATCATTGGTTTTAACTGATTGGAGACAACTTGGTTTGTTACAAGAAGTTGATTTTGGATGGAAGAATTCAGTGAATATTGTTCCTGTTCCTTGGAACATGTTTGGTTTTGTCGATTTGTGTCTTTTTTTGCCTCCAAGTAACTTGAATCCTTTAATGAAAGGTGGAGTTAGGATCTTTGTGTCACTTCCAAAAGCTTCAATGGCTAAGTTCAAGGAGGAGATGGAGTTCCTTAAGGTCATGAAAGTTGATGAAGATATATAA 1392 0.3477 MENHKTPFSLCLDTKDVVIVKPSKPTPLEILSLSTIDNDPNINILCQTIYVYKANHDFTNDQKDPACVIKEALSKALVYYYPLAGKITTLDDEKLGINCNGDGVPFLESNANCELSSLHYLEGIDVPTAQKLVFDNPSQDQTSPHPLVFKVTKFLCGGFTIGMGLSHSVCDGFGASKFYRALVELASGKNEPTLKPIWERERLIGKSDLKEEPFKFLIDKTSLATSPFLPTKEISHECFSLNGDTIKMLKMKLMKESGDDNMMKESFTTLETLGAYVWRSKVRALKLNNDGKTMFCLAIGVRKLLDPPLHEGYYGNAFVASNVILKVKELNEKPLFEVVKLIKESKKVASNNEYIRNSINMLETMRKGKIKIEGTGASLVLTDWRQLGLLQEVDFGWKNSVNIVPVPWNMFGFVDLCLFLPPSNLNPLMKGGVRIFVSLPKASMAKFKEEMEFLKVMKVDEDI 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g01534 463 Gene3D - 12 214 IPR023213 -
Trre8g01534 463 Gene3D - 229 451 IPR023213 -
Trre8g01534 463 PANTHER ACYL TRANSFERASE 4 15 453 - -
Trre8g01534 463 Pfam Transferase family 15 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g01534 Trre-Chr8 11687000 11688391 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g01534 12 449 Monolignol Biosynthesis Gene Families AT5G48930 27.753 1.21e-37 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g01534 K20240 - gmx:100801843 701.049