Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Trre8g01527 | ATGAACTCCGATGGCCGCAAATGGGATCGGAAAGATAACCGAATTTCCAAGAAACAGAAACTAATCAACACCGCCGAAGAAGAACTCGAAGCAAAACTAGGGTTTGATATTTTCTCAGAAGGTGAAAAACGACTTGGATGGTTACTCACTTTTTCATCTTCGTCGTATGAGGATGAGGATACCCGCAAAGCCTATAGTTGTGTTGATCTTTACTTTGTTACACAGGATGGGTCCTCATTCAAGACAAAATACAGATTTCGTCCTTATTTCTATGTAGCTACAAAGAATAAAATGGAGATGGATGTTGACGCATACCTGAGACGACGTTATGAAAGCCAGATTGCAGATATTAAAATTGTAGAAAAGGAAGACCTGGATCTTAAAAACCATTTGTCTGGATTGAGAAAATCTTATTTAAAGCTTTCATTTGATACCGTGCAACAACTGATGAATGTGAGGAATGACCTGATGCATGTTGTTGAAAGAAACAAGGCGAAGTCTGATGCTGCAGAAGCCTATGAGTCCATATTAACGGGGAGAAGAGAACAAAAACTTCAAGACTTTCTAGATTGCATAATTGATCTTCGTGAATATGATGTTCCTCACCATGTTCGCTTTGCTATTGACAACGATATACGGTGTGGTCTGTGGTATGATGTTGGTGTGTCCAATGATGGGGTTACACTTGAGAGGAGGACAGATCTTCTGCAGCGTGCTGAAGTTCGTGTTTGCGCATTTGATATTGAAACCACAAAACTTCCATTGAAGTTTCCTGATGCTGACTATGACTCAATTATGATGATTTCATATATGGTAGATAGGCAAGGGTATTTAATCATAAATAGAGAGTGTGTTGGGGATGATATAGAGGATTTAGAGTTCACTCCGAAGCCCGAGTTTGAAGGGTGTTTCAAGGTGACAAATGTTCAAAATGAGATTGAGCTTCTTAGATTGTGGTTTTCTCATATGCAAGAGGTGAAACCTGGCATCTATGTGACTTATAATGGTGATTTCTTTGACTGGCCATTTCTGGAACGGCGGGCAGCCCATCACGGGTTCAAAATGAGTGATGAACTGGGGTTTCAATGTGACATGAATCAAGGGGAATGTCGTGCTAAATTTGCTCCCCATTTAGATTGTTTTGCATGGGTTAAACGTGACAGTTATCTTCCTCAGGGGAGCCAAGGCCTCAAGGCTGTAACAAAAGCCAAGTTAGGTTATGATCCAGAGGAGGTGAACCCTGAGGACATGGTACGCTTTGCAAAGGAAAAACCTCAGATGATGGCTTCCTATTCTGTTTCTGATGCAGTGTCAACATATTACCTATATACAACTTATGTTCATCCCTTTATTTTCTCTCTTGCCACTATCATACCCATGTCACCAGATGAGGTTTTGCGCAAAGGCAGTGGGACCCTCTGTGAAATGTTGCTTATGGTTCAGTCATACAAGGCTAATGTTATCTGCCCTAACAAGCACCAATCTGATGCGGAGAAGTTTTATAAGAATCATCTTCTTGAGAGTGAGACGTACATAGGTGGCCATGTTGAATGCCTAGAAAGTGGTGTATTTAGATCTGATATTCCATGTAGTTTTACACTCGAGCCATCTGCCTTTGAGCAATTGATCAACAACCTTGATCGAGACCTACAATATGCTATAAGAGTAGAGGGTAAGATGGATTTGGATTCTGTCTCAAATTATGATGAAGTGAAGAATTCTATCATGGAAAAGCTTGTAAAATTACGAGATGCGCCGATACGTGACGAATGCCCACTCATTTATCATTTGGATGTAGCCGCAATGTATCCAAATATAATTTTAACAAACCGACTTCAGCCTCCATCAATTGTTACAGATGAGATTTGCACTGCATGTGACTTTAACCGTCCAGGAAAGACTTGTCTACGCAAGCTTGAGTGGGTTTGGCGTGGATCAACATTCACGGCAAAGAAAAGTGACTATTATCATCTAAAGAAGCAAATTGAGTCAGAGTTTGTTGATGGGACAAATGAAAGGTCATCAAAATCTTTTCTTGACCTGCCCAAGGCCGAGCAACAAACAAGACTAAAAGAACGTTTAAAGAAATACTGCCAAAAGGCATATAAACGGGTACTTGACAAGCCAGTTACCGAGCTCCGTGAAGCTGGAATCTGCATGCGCGAAAATCCATTTTATGTTGACACTGTTCGCAGTTTCCGGGATAGGAGGTATGAATATAAAGGCCTTAACAAGGTTTGGAAGGGAAAACTATCAGAGGCCAAAGCCAGTGGAAATTCTATGAAGATCCAAGAAGCACAAGACATGGTAGTGCTTTATGATTCATTGCAACTTGCTCACAAATGTATTCTTAATTCCTTTTATGGATACGTAATGCGCAAGGGTGCAAGATGGTATTCTATGGAAATGGCTGGTGTTGTCACATATACTGGTGCAAAAATAATTCAAAATGCTCGCTTGCTGGTTGAGAAAATAGGAAAACCACTTGAACTTGACACCGATGGTATCTGGTGTGCACTTCCTGGATCGTTTCCAGAAAATTTCACTTTTAAAACAATAGACTCTAAAAGGAAGTTGACAATCTCATACCCTTGTGTTATGCTTAATGTTGACGTGGCAATAAATAATACAAATGATCAGTACCAGACACTCACAGATCCAAATAGGAAAACTTATACAACTCATAGTGAATGCTCTATTGAATTTGAGGTGGATGGACCATACAAGGCAATGATCATACCTGCTTCGAAGGAGGAAGGAATTTTAATTAAGAAGCGATATGCTGTTTTTAATGATGATGGATCCCTTGCGGAGCTGAAAGGTTTTGAGATCAAGCGCAGAGGTGAACTGAAGCTAATTAAAGTTTTCCAGGCTGAGCTTTTTGAGAACTTTCTCCATGGCTCAACCTTAAAGGAATGCTATTCAGAAGTTGCTTTTGTGGCAAATCGCTGGCTCGATCTTCTTGATAACCAAGGAAATGATATTGCAGATAGTGAGTTGCTTGATTATATATCAGAATCAAGTACCATGAGCAAGTCTTTAGCTGATTATGGTCAGCAGAAGTCTTGTGCTGTTACCACTGCTAAACGTCTTGCTGACTTTCTTGGTGATACAATGGTCAAAGATAAAGGTCTTCGATGTCAGTACATAGTAGCAAGTGAACCTAAGGGAACACCTGTAAGTGAGCGTGCTGTTCCTGTGGCAATATTTCAAACTGATGCTGAAGTAATGAAGTTCTATGTCCGAAAATGGTGCAAGGTCTCATCAGATGTTGGCATTCGCTCTATAATTGACTGGTCCTATTACAAGCAGCGGCTTGGTTCTGCAATTCAAAAAATTATAACTATTCCTGCTGCAATGCAAAAGGTTGCAAATCCTGTCCCTAGGGTTGTTCATCCTGATTGGTTGCATAAGAAGGTCCGTGAGAAGGAGGACAAGTTTCGCCAAAGAAAAATAGATGATACCTTTAAGTCAATGAACAAGAATGAGAGCTCAAAAAAGTATAATGATTCTAATGGCATGGAGGATGGGATTGTTAATGATATGGAGGACTTTGGAAACAGGGGCAGGGGTTCTACATCCGGACCTAGACCAATTATACGGCATTACAAAGCTAACCATGAACAACATTCAGAGAAATTCAGTGGTCAAGAAGATTCGGAGCAGCATATTGACAGTAGCAACATAGATCAGTCACTTTCACTGTCACAACAAGATGAAATATGCGAAAATGTTGATAGAAATGTAGATTATCAAGGATGGCTTCAAATAAAAAAGAGAAAGTGGAAAAGTATGCTGGGAAAGAGAAAGAAGCAAAGATTGGATAATTCAAAGAGATCTGATAATTTAAATGGCAGTCTTGAACAAACAAATGGTAAGATGAATCACGGCAAAACTAATGTCAGTTCATATTTTAGAAGGAACGAGGTAGTCCTTACACGGTGCCACTGGCAGATAATACAGCTAGTGCACAGTTCACAAGTTGGCCAATTTTTTGCTTGGGTTGTTGTTGATGGGATTATGCTCAAGATTCCTATTTCTGTTCCTAGAGTCTTTTATCTTAACTCTAGATCACAAAATGAAGAGTGTTCGGGCAAACGTGTAAACAAGACTCTTCCTCATGGAAGACATAGTTATAACCTGTATGAGGTCACAATTAATGAAGAACAATATAAAGAAGAAAGCAAAAAACTTGCCGCTCTTCTAGCAGATCCTGATGTTGAGGGAATATATGAAACCAAGGTGCCACTGGATTTCAACGCTATAGTCCAGCTTGGTTGTGTTTGTAAGGTGGATAAAACTGCTAAAAAACGTAGCCTACAAGAGCCATGGAATTTGAGTGAGTTGCACATGAAGACCACAACAGAATGTGCATATCTTGAACAATCAATATCTTTTTTTTACTTATACCATAGCATCTCAGAGGGACGAGCTGTATATGTTGGATATTTTCCTGGGTCACAAGCAATAACTTTTGTGGTAGTTAATCCCTACCAAAACAAGGACTTATCACCAATTTTTCTCGAAAGACAATTTCGTGATGCTTGCAGAGCTTTGTCTATTGAGCCACCTCTGCGGAATGACATTAATTTTAAGGTGGAATATGTTGCACTTGTCAAGGATGCTGAAACAGTAATGCAAAGCACAATAAATGATCACAGGAGTGAACATCATGGGCCTATGGTTGCTGTCATCGAATGCCCAGATGTTCAACGATTAAAACTAGGCATTCGAGCTTTAGATGATTTTCCATGCCTGAGTATTCCTTCTAACGCACGTGATAGTCAATACCAGATACTTGGATGGCAACAAGTTGCGGCTAAACTTGGAATGCAACGTTGTGCGGCATCGGTCCAATGGCTAAATGAGAGAATTGCTCTATCCAGATATGCCCATGTACCACTGGGGAACTTTGAATTTGACTGGCTTATGTTTACAGTGGATACCTTCTTTTCTAGAGCATTGCGTGATAATCAACAGGTGCTTTGGATATCTGATGATGGTTTTCCAGATTTGGGTGGCAACAATGGTGAAGAAAACTGTTTTTTAGATGAGGTGCACCAATCTGTTTGTACGTTTCCTGGAGCTTATAGAAAAGTCACTGTGGAGCTAAAGATACACCACCTGGCTGTAGATGCCCTTTTAAAATGCAACCAAGTTAATGAAATGGAAGGAGGTGCTTTGTTAGGATTGGATCATGAATTTGATTCTGAAGCATTTCCTGTGAATGGTCAGAATGGCTTTGATGAGTCTACTTCATGCACACATGCCTTTCGAGTCCTAAAACATTTGATCCAGCGGTGCCTTTCAGATGCAGTCACATCTGGAAATGTTTATGCTGATGCAATATTGCAACATCTGTATAGATGGCTTTGCAGCCCTCAATCAAAACTTCATGATCCCGCTCTTCACCAGTTACTCCACAAGGTCATGCAAAAGGTCTTCGCGTTGTTGTTGGCAGAGTTCCGCAAGTTGGGTGCAACAATTGTTTTTGCAAACTTCTCGAAGATTATTATAGACACGGGAAAATATGATTTGTCTACAGCCAAAGCATACTGTGATAGTTTGTTAAAAACTATACAATCTAGAGACCTATTCGAGTGGATTGAGCTTGAACCACTGCAGTTTTGGTGCTCATTGCTATTCATGGACCAGTATAACTACGGTGGAATACCAGCAAAGTCTGATGAAGCCATGGATGATGAGTCTCCAGTTGACATAATATCAAGTTGGAATATTGCCGAGTACTTGCCAAAAAAAATCCAAGATCATTATGTTTTCATGGTTTCTCAATTCATGTATATTCCTTGGAACTATGCACGAAAACAAGCAGCGATCAGGGCTTCGGTGCTGAGTGGAGACTCCTGCACCCCATCAATTAATATTGGAGCTGCAGAGGCTTTTGAATCAGAAATAACTGAATATATTAAAGAACAGATTAGCTCTTACTTCACTGACAAACTCCTTGGAGTTGTTCGTGATATTGTTCTTCATATGAAGGGGATGGGCAGATCAGAAAACGATCTGAGTACATCATCTGGCCTTCCTCAACTGGCGGGTGATCTCCATAGAGGGGATGCAGCCTTGGAGTTTATCAAACATGTCTGTGCCGTCCTTGCCCTCGACCAAAGTGTGCAGCATGATGTTCACGTCATGAGAAAAAATTTGTTAAAATATGTTCGTGTCAGGGAGTTTGCTCCAGAAGCAGAGTTTCACGATCCTTGTCATTCCTTCACATTACCCAATGTTATCTGCAGCTATTGTAATGACTGCAGAGATTTGGACTTGTGCCGTGATCCGACTTTATTGACCGAAGAGTGGCATTGTGGCCAACCTCACTGTGGCCAGCCTTATGACCGTGAGGTGATGGAGAATGCTCTTCTTCAGATTGCACGACAAAGGGAGCGGCAATACCACTTGCAAGATCTCGTGTGTGTCAGGTGCAACCAGGTGAAAGCTGCACATTTGGCTGAGCAATGTGCATGTGCAGGCTCATTTAAGTGCAAGGAAGATGCAACAGAATTTCGCAAAAAGATGCTGGTTATCTTCAACATAGCTTCTCGTCAGAAATTCCAACTTCTTCAAGAATGTACCTCCTGGATGTTAGAACTCAAAATTTAA | 6621 | 0.4066 | MNSDGRKWDRKDNRISKKQKLINTAEEELEAKLGFDIFSEGEKRLGWLLTFSSSSYEDEDTRKAYSCVDLYFVTQDGSSFKTKYRFRPYFYVATKNKMEMDVDAYLRRRYESQIADIKIVEKEDLDLKNHLSGLRKSYLKLSFDTVQQLMNVRNDLMHVVERNKAKSDAAEAYESILTGRREQKLQDFLDCIIDLREYDVPHHVRFAIDNDIRCGLWYDVGVSNDGVTLERRTDLLQRAEVRVCAFDIETTKLPLKFPDADYDSIMMISYMVDRQGYLIINRECVGDDIEDLEFTPKPEFEGCFKVTNVQNEIELLRLWFSHMQEVKPGIYVTYNGDFFDWPFLERRAAHHGFKMSDELGFQCDMNQGECRAKFAPHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPEEVNPEDMVRFAKEKPQMMASYSVSDAVSTYYLYTTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQSYKANVICPNKHQSDAEKFYKNHLLESETYIGGHVECLESGVFRSDIPCSFTLEPSAFEQLINNLDRDLQYAIRVEGKMDLDSVSNYDEVKNSIMEKLVKLRDAPIRDECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEICTACDFNRPGKTCLRKLEWVWRGSTFTAKKSDYYHLKKQIESEFVDGTNERSSKSFLDLPKAEQQTRLKERLKKYCQKAYKRVLDKPVTELREAGICMRENPFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSMKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLVEKIGKPLELDTDGIWCALPGSFPENFTFKTIDSKRKLTISYPCVMLNVDVAINNTNDQYQTLTDPNRKTYTTHSECSIEFEVDGPYKAMIIPASKEEGILIKKRYAVFNDDGSLAELKGFEIKRRGELKLIKVFQAELFENFLHGSTLKECYSEVAFVANRWLDLLDNQGNDIADSELLDYISESSTMSKSLADYGQQKSCAVTTAKRLADFLGDTMVKDKGLRCQYIVASEPKGTPVSERAVPVAIFQTDAEVMKFYVRKWCKVSSDVGIRSIIDWSYYKQRLGSAIQKIITIPAAMQKVANPVPRVVHPDWLHKKVREKEDKFRQRKIDDTFKSMNKNESSKKYNDSNGMEDGIVNDMEDFGNRGRGSTSGPRPIIRHYKANHEQHSEKFSGQEDSEQHIDSSNIDQSLSLSQQDEICENVDRNVDYQGWLQIKKRKWKSMLGKRKKQRLDNSKRSDNLNGSLEQTNGKMNHGKTNVSSYFRRNEVVLTRCHWQIIQLVHSSQVGQFFAWVVVDGIMLKIPISVPRVFYLNSRSQNEECSGKRVNKTLPHGRHSYNLYEVTINEEQYKEESKKLAALLADPDVEGIYETKVPLDFNAIVQLGCVCKVDKTAKKRSLQEPWNLSELHMKTTTECAYLEQSISFFYLYHSISEGRAVYVGYFPGSQAITFVVVNPYQNKDLSPIFLERQFRDACRALSIEPPLRNDINFKVEYVALVKDAETVMQSTINDHRSEHHGPMVAVIECPDVQRLKLGIRALDDFPCLSIPSNARDSQYQILGWQQVAAKLGMQRCAASVQWLNERIALSRYAHVPLGNFEFDWLMFTVDTFFSRALRDNQQVLWISDDGFPDLGGNNGEENCFLDEVHQSVCTFPGAYRKVTVELKIHHLAVDALLKCNQVNEMEGGALLGLDHEFDSEAFPVNGQNGFDESTSCTHAFRVLKHLIQRCLSDAVTSGNVYADAILQHLYRWLCSPQSKLHDPALHQLLHKVMQKVFALLLAEFRKLGATIVFANFSKIIIDTGKYDLSTAKAYCDSLLKTIQSRDLFEWIELEPLQFWCSLLFMDQYNYGGIPAKSDEAMDDESPVDIISSWNIAEYLPKKIQDHYVFMVSQFMYIPWNYARKQAAIRASVLSGDSCTPSINIGAAEAFESEITEYIKEQISSYFTDKLLGVVRDIVLHMKGMGRSENDLSTSSGLPQLAGDLHRGDAALEFIKHVCAVLALDQSVQHDVHVMRKNLLKYVRVREFAPEAEFHDPCHSFTLPNVICSYCNDCRDLDLCRDPTLLTEEWHCGQPHCGQPYDREVMENALLQIARQRERQYHLQDLVCVRCNQVKAAHLAEQCACAGSFKCKEDATEFRKKMLVIFNIASRQKFQLLQECTSWMLELKI | 2206 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Trre8g01527 | 2206 | SMART | DUF1744_2 | 1507 | 1891 | IPR013697 | GO:0003887|GO:0005634|GO:0006260|GO:0008270 | |
| Trre8g01527 | 2206 | FunFam | DNA polymerase epsilon catalytic subunit | 941 | 1125 | - | - | |
| Trre8g01527 | 2206 | MobiDBLite | consensus disorder prediction | 1266 | 1298 | - | - | |
| Trre8g01527 | 2206 | Gene3D | DNA Polymerase, chain B, domain 1 | 52 | 225 | - | - | |
| Trre8g01527 | 2206 | MobiDBLite | consensus disorder prediction | 1207 | 1226 | - | - | |
| Trre8g01527 | 2206 | SMART | polmehr3 | 239 | 842 | IPR006172 | GO:0000166|GO:0003676|GO:0003887 | |
| Trre8g01527 | 2206 | PANTHER | DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A | 16 | 2203 | IPR029703 | GO:0003677|GO:0003887|GO:0006260|GO:0006281|GO:0008622 | |
| Trre8g01527 | 2206 | MobiDBLite | consensus disorder prediction | 1279 | 1298 | - | - | |
| Trre8g01527 | 2206 | MobiDBLite | consensus disorder prediction | 1207 | 1225 | - | - | |
| Trre8g01527 | 2206 | Pfam | Domain of unknown function (DUF1744) | 1525 | 1891 | IPR013697 | GO:0003887|GO:0005634|GO:0006260|GO:0008270 |
Showing 1 to 10 of 24 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Trre8g01527 | K02324 | - | gmx:100812003 | 3798.82 |
Showing 1 to 1 of 1 entries