Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g01523 ATGAGTTTTGATCAAGATTCTCTTTCTCTTCAATCAACTATGATAACTACTACCTTCACTTTCCTCTTCTTCACTTTCACTCTTCTGTTTTCTTTCTTCTCTCTTCTCATCTACATCTCAAGAATTAAACCATGGTGTAATTGCAACACTTGCAATACCTACTTAACCATGAGTTGGTCACACAAATTCATCAACCTTGTAGATTACTATACACATCTTCTTCAAAACTCACCAAGTGGAACAATTCATGTTCATGTTTTAGGTAACATTATTACCTCAAATCCACAAAATGTTGAATACATCCTCAAAACAAATTTCAACAACTACCCAAAAGGTAAACAATTTTCCACAATTCTCGGAGATCTTCTCGGCCGTGGTATCTTCAACGTGGATGGCGATTCGTGGAAGTTTCAGCGAAAAATGGCATCTCTTGAACTCGGTAGCGTAGCTATTCGCTCTCACGCTTTTGAACTTGTAACAGAAGAAATCAGAACAAGACTTATTCCTTTGATGTCTTCTGCTACAAAAGACAAAACCGTGAGAACTGACACAAAATCCAGAGCAGACAATATTTCGGAAAACGAGGATGTTGTTTTGGACATGCAAGATATTCTTAGAAGATTCTCATTTGACAACATTTGCAAATTCTCTTTTGGGTTAGATCCATGTTGTCTTGTTCCATCACTTCCAATTTCAAATCTTGCTAATGCTTTTGATTTATCTTCAAAGCTTTCAGCTGAAAGAGCAATGAGTGCTTCTCCAATAATATGGAAAATGAAACGTTTCTTCAATGTTGGGTCAGAGAAGAAGCTGAAAGAAGCAATTAAAATAGTCAACAATTTAGCAAACGAGATGATAAAACAAAGACGAGAAATTGAAAATGGAGTTGACTCGCGAAAAGATCTTTTATCTCGTTTTATGGGTTCTTTGAATTCAAACGACGACAAATATTTAAGAGATATTGTCGTTAGTTTTCTTTTAGCTGGTCGTGATACTGTTGCTTCCGCATTAACCGGTTTTTTTATTTTATTGTCAAAAAACCCGGAAGTCGAAAAAAAGATTCGGGTTGAGTTAGACCGGATAATGAACCCGGTTCAAGATTGTGCTACTTTTGAACAAACGCGTGAAATGCATTATCTTAATGGAGCTATTCATGAGAGTATGAGGCTTTTTCCACCGGTTCAATTCGATTCAAAATTTGCATTGGAAGACGATGTTTTACCTGATGGAACTTTTATTAAAAAGGGGAGTCGGGTTACTTATCATCCGTATGCGATGGGCCGGATGGAGAAAATTTGGGGACCAGATTGTTTGGAATTTAAACCGGAAAGATGGTTGAGTGAAGGTGTGTTTGTACCAAAATGCCCTTTCAAGTATCCGGTTTTTCAAGGCGGTTCGAGGGTTTGTTTGGGAAAGGAGTTGGCTATTGTGGAAATGAAGGCTGTTGTTGTTGCATTGGTAAAACGGTTTGATGTTCGGGTTGTTGGGCCGAACCAGGTGCCCCAGTTTATTTCGGGTCTAACCGCCACATTCAGAGGTGGCTTGCCGGTTGAGGTTTATGAAAGAATGTAA 1572 0.3823 MSFDQDSLSLQSTMITTTFTFLFFTFTLLFSFFSLLIYISRIKPWCNCNTCNTYLTMSWSHKFINLVDYYTHLLQNSPSGTIHVHVLGNIITSNPQNVEYILKTNFNNYPKGKQFSTILGDLLGRGIFNVDGDSWKFQRKMASLELGSVAIRSHAFELVTEEIRTRLIPLMSSATKDKTVRTDTKSRADNISENEDVVLDMQDILRRFSFDNICKFSFGLDPCCLVPSLPISNLANAFDLSSKLSAERAMSASPIIWKMKRFFNVGSEKKLKEAIKIVNNLANEMIKQRREIENGVDSRKDLLSRFMGSLNSNDDKYLRDIVVSFLLAGRDTVASALTGFFILLSKNPEVEKKIRVELDRIMNPVQDCATFEQTREMHYLNGAIHESMRLFPPVQFDSKFALEDDVLPDGTFIKKGSRVTYHPYAMGRMEKIWGPDCLEFKPERWLSEGVFVPKCPFKYPVFQGGSRVCLGKELAIVEMKAVVVALVKRFDVRVVGPNQVPQFISGLTATFRGGLPVEVYERM 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g01523 523 CDD CYP86A 84 515 - -
Trre8g01523 523 Gene3D Cytochrome P450 54 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g01523 523 PRINTS P450 superfamily signature 460 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g01523 523 PRINTS P450 superfamily signature 469 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g01523 523 PRINTS P450 superfamily signature 328 345 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g01523 523 PRINTS P450 superfamily signature 382 393 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g01523 523 PANTHER CYTOCHROME P450 35 516 - -
Trre8g01523 523 SUPERFAMILY Cytochrome P450 65 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g01523 523 Coils Coil 271 291 - -
Trre8g01523 523 Pfam Cytochrome P450 90 502 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g01523 523 PRINTS E-class P450 group I signature 459 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g01523 523 PRINTS E-class P450 group I signature 317 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g01523 523 PRINTS E-class P450 group I signature 469 492 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g01523 523 PRINTS E-class P450 group I signature 337 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g01523 Trre-Chr8 11611524 11613095 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g01523 36 522 Cytochrome P450 AT2G27690 58.943 0.0 600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g01523 K20624 - gmx:100813091 729.939