Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g01506 ATGGAGTTTGCTAAAATTTTAAAAAGTTTCACCATTCTCCTGTTTATTGGATGTACTTTGGTGAATGGATCCACCCCAAAGCACTATATAATTTATATGGGAGATCATTCACACCCTAATTCAGAGTCTGTCATCAGAGCAAACCATGAGATACTAGCATCAGTCACTGGAAGTCTCGGTGATGCAAAGGCAACAGCACTACACCATTATAGTAAAAGCTTTCGAGGCTTTTCGGCTATGATTACGCCAGAACAAGCTAATAAGCTTGCAGAATATGATTCAGTTGTGTCGGTTTTTGAGAGTAAAATGAATATGCTCCACACTACACATTCTTGGGATTTTCTTCGGTTAGACTCGGTCTACAAGAGCAACCGTATAGCTCTAGACTCCACATCCGATGTCATTGTTGGTGTCATTGACTCAGGGGTGTGGCCGGAATCGGAAAGCTTCAATGATTATGGATTAGGTCCTGTGCCTGAGAAATTCAAGGGAGAGTGTGTTACTGGTGATAATTTTACACTTGCTAATTGCAACAAGAAAATTATCGGTGCACGATTCTATTCAAAAGGGATTGAAGCAGAAAATGGTTCTCTAAAAGATGTCAACAAGATTTTCTTCAGGTCAGCTAGAGACAGCGATGGACATGGAACACACACAGCTTCAACAATTGCAGGATCGATTGTAGCTAATGCTAGCTTATTCGGCATTGCCAAAGGAACAGCTAGAGGCGGTGCTCCAAGTGCAAGACTAGCTATCTATAAGGCTTGTTGGTTTGGACTTTGCAGTGATGCTGATGTTCTTTCTGCTATGGATGATGCCATTCATGACGGTGTTGACATACTTTCTCTTTCTCTTGGTCCTTTTCCTCCACAGCCGAGTTACTTTGTGAACGCAATCAGTGTTGGAGCATTCCATGCATTCCAAAAGGGAATTCTTGTTTCTGCTTCAGCTGGAAACTCGGTTTTTCCTCGTACTGCAACCAATGTTGCTCCTTGGATCCTCACTGTCGCTGCTAGTACGGTAGACAGAGAATTCAGTTCAGATATCTACCTCGGTAACTCAAAAGTTTTGAAGGGTCTTTCTCTGAATCCAATAAAAATGGAGGGTTATCATGGTTTGATATATGGAAGTGCAGCTGCAGCCTCTGGAGTTCCAGCAACAAATGCTAGCTTCTGCAAGAACAATACTCTAGACCCTAACTTAATCAATGGAAAAATAGTTATCTGCACAATAGAAAAATTCACCGACAAAAGAGGACAAAAAGCCATAATAGTAAGGCAAGGTGGTGGTGTCGGAATGATACTTATCGACCATAATGCGAAAGAAGTTGGTTTTCAGTTTGTTATTCCAACCACTCTTATTGGTCAGGATGCTGTAGAAGAGCTTCAAGCATACATAAGCACAGATAAGAATCCTATTGCTAAAATATATCCAACAGTAACTGTTGTTGGTACCAAACCTGCTCCAGAAGCTGCAGCTTTTTCTTCTATGGGGCCAAATATAATAACACCAGATATTATTAAGCCTGACATAACAGGACCTGGAGTGAATATTTTGGCAGCATGGTCTCCAGTGGCTACTGAAGACACAGTTGAACAACAATCTGTCAACTATAACATCATTTCAGGAACATCAATGTCTTGTCCGCACATATCCGCAGTTGCAGCGATTATCAAATCTTACAACCCTTCCTGGTCTCCTGCAGCCATAATGTCAGCCATAATGACAACAGCAACAGTACTGGATAACACAAACCATATCATAGGAAGAGATCCAAATGGAACTCAAACAACTCCATTCGACTACGGATCCGGACACATTAATCCACTTGCAGCACTCAATCCCGGATTAGTATACGATTTTAGTTCACAAGATGCTCTCGATTTTCTCTGCAGCAATGGAGCAAACCCATCACAGCTTAAAAACATCACTGGTGAACTCACTCAATGTCAGAAATATCCTACACCTTCCTACAACTTCAATTACCCTTCAATTGGTGTATCCAACTTGAATGGAAGTTTAAGCGTTTATCGAACCGTTACATACTATGGTCAAGAACCAGCAGTGTATATTGCAAGTGTTGAAAATCCATCTGGTGTGAATGTTACGGTTACGCCGGCGGTACTGAAGTTCTGGAAAATAGGAGAGAAGCTAACTTTTAGGATTGATATCACCCCTTTCATGGAAAGTAATGGAAACTTTGTGTTTGGTGCCTTGACATGGAAGAATGGTGAACAAAGGGTTAGGAGTCCTATTGGTGTTAATGTAGTATCTATATAG 2280 0.4118 MEFAKILKSFTILLFIGCTLVNGSTPKHYIIYMGDHSHPNSESVIRANHEILASVTGSLGDAKATALHHYSKSFRGFSAMITPEQANKLAEYDSVVSVFESKMNMLHTTHSWDFLRLDSVYKSNRIALDSTSDVIVGVIDSGVWPESESFNDYGLGPVPEKFKGECVTGDNFTLANCNKKIIGARFYSKGIEAENGSLKDVNKIFFRSARDSDGHGTHTASTIAGSIVANASLFGIAKGTARGGAPSARLAIYKACWFGLCSDADVLSAMDDAIHDGVDILSLSLGPFPPQPSYFVNAISVGAFHAFQKGILVSASAGNSVFPRTATNVAPWILTVAASTVDREFSSDIYLGNSKVLKGLSLNPIKMEGYHGLIYGSAAAASGVPATNASFCKNNTLDPNLINGKIVICTIEKFTDKRGQKAIIVRQGGGVGMILIDHNAKEVGFQFVIPTTLIGQDAVEELQAYISTDKNPIAKIYPTVTVVGTKPAPEAAAFSSMGPNIITPDIIKPDITGPGVNILAAWSPVATEDTVEQQSVNYNIISGTSMSCPHISAVAAIIKSYNPSWSPAAIMSAIMTTATVLDNTNHIIGRDPNGTQTTPFDYGSGHINPLAALNPGLVYDFSSQDALDFLCSNGANPSQLKNITGELTQCQKYPTPSYNFNYPSIGVSNLNGSLSVYRTVTYYGQEPAVYIASVENPSGVNVTVTPAVLKFWKIGEKLTFRIDITPFMESNGNFVFGALTWKNGEQRVRSPIGVNVVSI 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g01506 759 PRINTS Subtilisin serine protease family (S8) signature 211 224 IPR015500 -
Trre8g01506 759 PRINTS Subtilisin serine protease family (S8) signature 542 558 IPR015500 -
Trre8g01506 759 PRINTS Subtilisin serine protease family (S8) signature 131 150 IPR015500 -
Trre8g01506 759 ProSiteProfiles Serine proteases, subtilase domain profile. 111 613 - -
Trre8g01506 759 Gene3D - 630 757 - -
Trre8g01506 759 FunFam Subtilisin-like protease SBT1.5 133 355 - -
Trre8g01506 759 Pfam Subtilase family 132 585 IPR000209 GO:0006508|GO:0008236
Trre8g01506 759 SUPERFAMILY Subtilisin-like 106 617 IPR036852 GO:0004252|GO:0006508
Trre8g01506 759 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 29 752 IPR045051 -
Trre8g01506 759 CDD Peptidases_S8_3 106 579 IPR034197 -
Trre8g01506 759 CDD PA_subtilisin_like 348 476 - -
Trre8g01506 759 Gene3D Peptidase S8/S53 domain 133 625 IPR036852 GO:0004252|GO:0006508
Trre8g01506 759 Pfam Fibronectin type-III domain 659 754 IPR041469 -
Trre8g01506 759 ProSitePatterns Serine proteases, subtilase family, serine active site. 543 553 IPR023828 -
Trre8g01506 759 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 107 IPR037045 -
Trre8g01506 759 Pfam PA domain 389 462 IPR003137 -
Trre8g01506 759 Gene3D - 342 483 - -
Trre8g01506 759 Pfam Peptidase inhibitor I9 28 102 IPR010259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g01506 Trre-Chr8 11407065 11411600 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g01506 29 756 Subtilisin-like Serine Gene Family AT2G04160 43.250 0.0 562
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g01506 - - gmx:100792672 1266.91