Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g01491 ATGGCGGAAGAACATAGATGTCAAGCTCAGCGTCTCTGTGCTAACAATTGCGGTTTCTTTGGTATTCCCGCCATGCAAGATCTTTGTTCCAAATGTTACCGTGATTTGCAATTGAAGGAACAACGTTCTTCTTCTGCGAAACTGGTTCTTAATCAAACGCTAATTTCTCAATCTCAACCGTCGATTTCTGTTTCTGAAACTGTTGTTCAACAATCGCCTTCACCGTTGGTGGTTGATTCTTCTACTTTACCGGTGGAATCGGTTGAGACGGCGGCGGCGGTGGTGGTTCAGCCGAATCGTACAGATTCCTTTCTCAAAGCAATTCAAACTAATACATCTTTCTCTGCAAACGATTCCTTTGCCAAAGATTCTTTCTCCACACTTGGTCAACACAGATATGCATCTATTCTAACACATAGTTTTGGGCCTTGCCAACTTGATATGCTTTTATGCTGTTATTTTGGAAGACTCAAATTCTATTTATGTTTGCAAATTAGGTTCTCTCAATCAAATCCTCCGACATGTTTCAAGATCAACGGTAATTTAAGCTCAAGTTGTTGTCCCAGAACCCATTTGACGATGGAAGTTTCTAGGTTGCTTAAACATCTTGTGGGTACAAGATTATATTTGTGCGGGTTGTGTTTACTCTCTACTAATGTTTAA 663 0.4042 MAEEHRCQAQRLCANNCGFFGIPAMQDLCSKCYRDLQLKEQRSSSAKLVLNQTLISQSQPSISVSETVVQQSPSPLVVDSSTLPVESVETAAAVVVQPNRTDSFLKAIQTNTSFSANDSFAKDSFSTLGQHRYASILTHSFGPCQLDMLLCCYFGRLKFYLCLQIRFSQSNPPTCFKINGNLSSSCCPRTHLTMEVSRLLKHLVGTRLYLCGLCLLSTNV 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g01491 220 Pfam A20-like zinc finger 11 34 IPR002653 GO:0003677|GO:0008270
Trre8g01491 220 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 12 59 - -
Trre8g01491 220 ProSiteProfiles Zinc finger A20-type profile. 7 41 IPR002653 GO:0003677|GO:0008270
Trre8g01491 220 Gene3D - 1 73 - -
Trre8g01491 220 SMART A20_3 10 34 IPR002653 GO:0003677|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g01491 Trre-Chr8 11313708 11319014 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g01491 1 38 C2H2 Transcription Factor Family AT3G52800 63.415 1.33e-09 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g01491 - - mesc:110625469 118.627