Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g01475 ATGGAAGAAGCCGTGATTGAAAAGCAACGTATGATCGAGATCAAAGCAATGTTGCAAAATATGGAAGCCATTGTGGAAAAGGAACGCAATACAACACCTTTCAACCCTTTACCTCATTTTACTTTGCACAAAGTGTTATCTCAAGAAGCTCCACACTTTTATACCGATCAAGAGTTAGCACAAATAGAAGATATCAGTCAAAATAATTTCCAAGTGAATAACAAAAAACGGGGTCACTCGAGTGATGAAGGCGATATGTCTTCCGAAGAAAGAAAAGTGAAATCAAAACCCGCAAAGAAAGACATTGTGCCATCCCCGCCACCAAAATTGCCTATTCTTGTCGAGAACAAGATCAAAGAGCTGAATGGTCGTGATATCAAATATGTCATGCATAAAGAATTGTTCCCGACAGATCTCGACAAAGAACAAGGTCGTCTTTCACTTCCAGTCAAACTCGATTATCTCAACGAGAAAGAAAAGACAGCATTAGAAAAAAGAGACAAAAAAGGTAAACTAGTTGGTTTAGATGTGGTTTTATTGGATCCTTACTTTAGAGAATTTTCGATGTCATTGAGGAAGTGGAACATGCGCAAGGATAGTGTTTACAATCTTGTGAAAAATTGGAAACTTGTTTTGTCGACAAACAAATTTAAAAAGGACCAAAAGCTTAACATTTGGTCATTTAGGGACATCAATGACAAGTTGCACTTTGTACTCGACGACAAAGTAAATTCCGAAGGAAGTGAAGAGCTCAACAATTCGGATGACAAAAAAGTAAGTTCTGAAGAAAGTGAAGAGCTGAACAATTCAGTTAATATCTCTGAAACAAGTGAAGCAAACAGTTATGGTATTAATCTGGATACGTAA 867 0.3702 MEEAVIEKQRMIEIKAMLQNMEAIVEKERNTTPFNPLPHFTLHKVLSQEAPHFYTDQELAQIEDISQNNFQVNNKKRGHSSDEGDMSSEERKVKSKPAKKDIVPSPPPKLPILVENKIKELNGRDIKYVMHKELFPTDLDKEQGRLSLPVKLDYLNEKEKTALEKRDKKGKLVGLDVVLLDPYFREFSMSLRKWNMRKDSVYNLVKNWKLVLSTNKFKKDQKLNIWSFRDINDKLHFVLDDKVNSEGSEELNNSDDKKVSSEESEELNNSVNISETSEANSYGINLDT 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g01475 288 MobiDBLite consensus disorder prediction 246 288 - -
Trre8g01475 288 SUPERFAMILY DNA-binding pseudobarrel domain 129 231 IPR015300 -
Trre8g01475 288 MobiDBLite consensus disorder prediction 76 99 - -
Trre8g01475 288 MobiDBLite consensus disorder prediction 265 288 - -
Trre8g01475 288 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 46 242 IPR005508 GO:0003677
Trre8g01475 288 Gene3D - 120 250 IPR015300 -
Trre8g01475 288 MobiDBLite consensus disorder prediction 246 264 - -
Trre8g01475 288 Pfam B3 domain-containing protein At2g31720-like 115 213 IPR005508 GO:0003677
Trre8g01475 288 MobiDBLite consensus disorder prediction 67 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g01475 Trre-Chr8 11209862 11210728 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g01475 118 229 B3 DNA Binding Superfamily AT1G05930 25.641 2.06e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g01475 - - tpra:123924633 397.897