Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g01442 ATGTCTTCCAACAAGAAAAACCTTATAAGAACATTTTTCACTTCAAATGGAAGTTGTGGATCATGTGCAAAATCAAAAGCAATTCAAGTACATGAACCAACCCAAAAACCCAAAATTTCCATCAACCAAAAGGTCACAAACCCAAGTAGTAAAGGTTCTTCCACTACAACTTCAGGTGAAAGGAACGGCGCCATTTGTAGCATCGACGACAGCGAAGATTTCTCCACCACTACCTTTTCTGAAGGTGAGACAACAAACAACTACTTTGTACCCAAACAAAGTCCACTAATGAACACAGTGGCGGTCGAGAAGGACTCGGAGGATCCATATCATGATTTCAAACACTCTATGCTTCAAATGATCTTTGAGAATGAGATTGATTCGGAGGATGATCTTCAAGATCTTCTCCGGTGTTTTCTTCATCTTAATTCTAGTTGTTATCACAGTGTGATCGTTAAAGTCTTTAATGAAATCTGCCATGAAGCTTTCCCCGACAAGGTTTGTAGTATCACTACCAAACCTTCCGGATGA 531 0.3974 MSSNKKNLIRTFFTSNGSCGSCAKSKAIQVHEPTQKPKISINQKVTNPSSKGSSTTTSGERNGAICSIDDSEDFSTTTFSEGETTNNYFVPKQSPLMNTVAVEKDSEDPYHDFKHSMLQMIFENEIDSEDDLQDLLRCFLHLNSSCYHSVIVKVFNEICHEAFPDKVCSITTKPSG 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g01442 176 ProSiteProfiles OVATE domain profile. 102 161 IPR006458 -
Trre8g01442 176 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 49 162 IPR038933 GO:0045892
Trre8g01442 176 MobiDBLite consensus disorder prediction 30 68 - -
Trre8g01442 176 MobiDBLite consensus disorder prediction 35 68 - -
Trre8g01442 176 Pfam Transcriptional repressor, ovate 106 161 IPR006458 -
Trre8g01442 176 NCBIfam uncharacterized plant-specific domain TIGR01568 100 160 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g01442 Trre-Chr8 10961809 10962339 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Trre8g01442 Ovate 5.6e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g01442 - - mtr:11445731 290.041