Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g01429 ATGGTGGAAAAGAAAGTTGTGATTATTGGAGGTGGGGTTGCTGGTGCTGTTCTTGCTAAAACTATACAACATCAAGCAACTGTCACACTTATTGATCCGAAGGAGTATTTTGAGATTCCATGGGCAAGTTTGAGGGCAATGGTGGAACCATCCTTTGCAGAAAGGACAGTGATTAACCATAGAGAGTATTTCACAAAAGGTGACCTTATTGTATCAACTGCCATTAACATAACTGAATCTGAAGTCTTCACTGCCGATGGCCGTCATATTGCTTATGATTATCTTGTTATTGCCACCGGTCACACAGATCCTATCCCGAAAACAAGGACCGAAAGACTTGACCAATACAAAGGAGAAAATACAAAGATAAAATCCGCACGTTCAATTTTAATTGTCGGAGGAGGACCAACTGGTGTCGAGCTAGCAGCCGAGATAGCTGATGATTTTCCTGACAAAAAAGTGACCATAGTGCACAAAGGATCAAGATTGCTAGAATATATCGGAGCGAAAGCTTCGAGAAAGACATTAAAATGGCTTAAATCAAGGAAAGTTGATGTGAAGCTAGATCAATCAGTTGACTTAGACTCATTCAGAAATGAGACTTATCAAACTTCAGCTGGAGAGAGTATAGAAGCAGATACACATTTTGTATGTATAGGTAAACCACTTGCTTCAACATGGCTTGGAGAAACTTTTTTGAAAGAAGATTTGGATGGTAATGGAAGAGTTCAAGTCGATGAATACTTGAGAGTTAAGGGTAGGAGCAATGTTTTCGCAATTGGAGATATCACAGATATTCAAGAAATAAAACAAGGAGTGTATGCACAAGGCCATGCTAAATTAGTAGCGAAGAATCTAAAGCTATTGATCGAAGGAGGGGAGAAAGAACGTAAATTGGGAACTTACAAGGCACAAGCACCGATATCTATTGTTTCGCTCGGAAGAAAACATGGAGTTGCACAGTTCCCTTTCATGACAGTTATTGGAAGGTTTCCTGGTATTATCAAATCAGGAGATTTGTTTGTTGGAAAAACAAGAAAAGAATTAGGACTTGAACCTAATGCTAAAAAATCTTAA 1077 0.389 MVEKKVVIIGGGVAGAVLAKTIQHQATVTLIDPKEYFEIPWASLRAMVEPSFAERTVINHREYFTKGDLIVSTAINITESEVFTADGRHIAYDYLVIATGHTDPIPKTRTERLDQYKGENTKIKSARSILIVGGGPTGVELAAEIADDFPDKKVTIVHKGSRLLEYIGAKASRKTLKWLKSRKVDVKLDQSVDLDSFRNETYQTSAGESIEADTHFVCIGKPLASTWLGETFLKEDLDGNGRVQVDEYLRVKGRSNVFAIGDITDIQEIKQGVYAQGHAKLVAKNLKLLIEGGEKERKLGTYKAQAPISIVSLGRKHGVAQFPFMTVIGRFPGIIKSGDLFVGKTRKELGLEPNAKKS 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g01429 358 ProSitePatterns EF-hand calcium-binding domain. 236 248 IPR018247 -
Trre8g01429 358 PANTHER APOPTOSIS-INDUCING FACTOR 1 3 351 - -
Trre8g01429 358 SUPERFAMILY FAD/NAD(P)-binding domain 1 286 IPR036188 -
Trre8g01429 358 Gene3D - 1 343 - -
Trre8g01429 358 PRINTS Pyridine nucleotide disulphide reductase class-II signature 124 148 - -
Trre8g01429 358 PRINTS Pyridine nucleotide disulphide reductase class-II signature 5 27 - -
Trre8g01429 358 PRINTS Pyridine nucleotide disulphide reductase class-II signature 252 270 - -
Trre8g01429 358 Pfam Pyridine nucleotide-disulphide oxidoreductase 4 278 IPR023753 GO:0016491
Trre8g01429 358 PRINTS FAD-dependent pyridine nucleotide reductase signature 128 146 - -
Trre8g01429 358 PRINTS FAD-dependent pyridine nucleotide reductase signature 242 264 - -
Trre8g01429 358 PRINTS FAD-dependent pyridine nucleotide reductase signature 6 25 - -
Trre8g01429 358 FunFam apoptosis-inducing factor 2 2 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g01429 Trre-Chr8 10883878 10886532 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g01429 3 270 Chloroplast and Mitochondria Gene Families AT4G21490 26.911 1.10e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g01429 K22745 - gmx:100817682 570.466