Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g01426 ATGGGGTTTTTGTTGAAAGAAGCTTTGAAGACTCTTTGTGCTAGAAATCAGTGGTCTTATGCTGTTTTTTGGAAGATCGGTTGCAATAATTCTAAGCTGCTAATCTGGGAAGATTGTTACTATGAACCCTTACCATCTCATTTCCTTCCACAAATTGTTGGAACGTCTAATTTGCCTTACCGAGATGGGGAAGGATGCTGGTTTTCTTCCGATTCTCAACTAAGGATTCAAGAGGACGACAGAGTCGGTTCATTGATTAACAAAATGATGGTGAATAGTTCTGTCAATGTTGCTGGTCAAGGGATACTTGGACGGGCGACATTCACAGGAAATCATCAGTGGATTGTTTTGAATAATTTCGTTAAAGATGCATATCCACCAGAGGTATTAACTGAGCTGCATTGCCAATTTTCAGCTGGAATGCAGACAGTGGCGGTTATTCCTGTGCTTCCCCATGGGGTTGTTCAACTTGGTTCTTTCTTGCCGATAATGGAGAATATCGGATTTGTGAATGATGTGAAGAACTTAATCTTTCAATTGGGATGTGTTCCTGGTGCCCTTCTATCTGAAGACTATCCGGCAAGACTTCCTAATGGATCCGTGGCTGATTGTGTGCCTGTGTCATTTGATCCACAAATCATTACTCCAAACTTCACTCCGTCAGTAGCTAATGGATCTAACCAACCGAGTAATTCATCGCATGGTCCAATGTCGGTTGCTTCTCAACTACCTCCTTTTCGAAGTCGAGAAATAAATAGTCATCGTGGTACTGTATTAACAACTCAATCCCAAAACCTAAACCAGATATTTGATAGCCCTGGCCAACCAAAGGCTCAACGAGAGAACACAACTGTTAAGGCCGAAGCTGTAGTGATACCTGCAAATCTCGATTCTTCATATCTGCAACGGCGTTCTGTTTCATATAATGCAAGATCGAAATTCAACGAATTAACTGATTCAAACGTATCCAATCTGAATGGTTTCAGCCTTAAACATATGGACCAACAAATCTTATCAGGTATTGGAAGGCAAATTCATGGTAACCCTAATATGAATCCATCATCAAGTGGCTTAAATATGTCTCGATCTAAAACGGATGGAGGCCAAATTTATTATCAGAATTCTAACAACACTTCATATCTTGGAGGAATCCCAATATGTAGTGGGATGAATAATAATCTTCTAAGGACAAATATGATTAACTGCTCGGTTTCATCCCCTCCCCAATTTTCCACTGCCGGTTATTCCGGAACACAAAAAGTAGAGTTTGGAATTCAAAACAATAATTCAACTAAAGCTGCAAATCACATGCATCTAGAAGGCTTTGATCAGAAGAATCTTCCCAATGATTTAAAGCATGCTCAAGATGCTTTGGCTTCCACGGATCAAAGGATAGATGATTTGCTTGAGGCTCTAAAGATCCCATCATCGTCATCTCTTCACCATGAGGAGCACGTGCCTATGAATGATCACATCCCTGATTTTCTTCGTGATTGCCTAGATAAAGATGTTACTGACAACCACATGATGAAAACGAACTTTGAACACGGAGAAGCTTGTACTCAACTTTCGTCAGGTGATGATGACTTGTTTGATGTCTTGGGCTTGGATTTCAAAAGGAAACTGCTGAACGGAAACTGGAATACATTATTTGCCAATGAAACAGATGCCAGTGCAGAAAAACACGACCAAAAGGCAATTTGTAAGAATTTTCCGGTTGTAGGTCATGATAATATTTTCCCGGTTAATGAAGCAATATCAGGCAACAGCATCTTCTCTGGAACAAACACTGATCACCTCTTAGATGCTGTGGTCTCGAAGAATCAATCTGCTGCGAATCAGAATTCTGATGAAATGTCTTGCAGGACCACAGTAACAAGGATTAGTACAGCGTCTGTTCTTTCTCCTACCGGAATGCAGATTATGCGCAATCATGTTGGCCAGGTGGCACCGTTTGATTTTCCCAAGACGGAGGTTAAAACAGGTGCTGCAGAAACGAGTTCTCTGATTTCCGGCGGCAGCAAAGATAATGTTGGAAACTGTTCTCAAACCACTTCCATATATGGTTCTCAACTTAGTTCGTGGGTGGAGAATAGTAGCACCAATATGAAGCGTGAAAATAGTGTTTCAACTGGATACTCTAAGAGGCCAGATGAAGTTAGCAAATCAAATCGTAAAAGGCTTAAACCTGGAGAGAACCCTAGACCTCGACCCAAAGATCGCCAAATGATTCAAGATCGTGTGAAAGAGTTGCGTGAAATTGTGCCTAATGGTGCAAAATGTAGCATAGATGCTCTTCTTGAACGAACTATCAAACATATGCTTTTCTTGCAAAGTGTGACGAAGCATGCTGACAAGCTGAAACAGACTGGGGAATCGAAGATTATTAGTAAAGAAGGTGGTTTGTTATTAAAAGACAACTTTGAGGGAGGTGCTACATGGGCATATGAGGTTGGTTCACAATCTATGGTGTGCCCTATCATAGTTGAAGATCTTAATCATCCTCGTCAGATGCTAGTGGAGATGCTTTGTGAGGAACGAGGTTTCTTTCTGGAAATAGCCGACTTAATCAGAGGATTAGGGTTAACCATCTTGAAGGGTGTCATGGAAGCTCGCAATGACAAGATCTGGGCACGCTTTTCTGTTGAGGCAAATAGGGATGTAACAAGGATGGAAATATTCATGTCACTAGTTCGACTTTTGGAACAAACAGTGAAGGGAGGTGCATCTTCATCAAATGCCGCAGTTGATAATAACATGATGGTTTATCATTCTATCCCGCAATCCACCTAG 2793 0.4117 MGFLLKEALKTLCARNQWSYAVFWKIGCNNSKLLIWEDCYYEPLPSHFLPQIVGTSNLPYRDGEGCWFSSDSQLRIQEDDRVGSLINKMMVNSSVNVAGQGILGRATFTGNHQWIVLNNFVKDAYPPEVLTELHCQFSAGMQTVAVIPVLPHGVVQLGSFLPIMENIGFVNDVKNLIFQLGCVPGALLSEDYPARLPNGSVADCVPVSFDPQIITPNFTPSVANGSNQPSNSSHGPMSVASQLPPFRSREINSHRGTVLTTQSQNLNQIFDSPGQPKAQRENTTVKAEAVVIPANLDSSYLQRRSVSYNARSKFNELTDSNVSNLNGFSLKHMDQQILSGIGRQIHGNPNMNPSSSGLNMSRSKTDGGQIYYQNSNNTSYLGGIPICSGMNNNLLRTNMINCSVSSPPQFSTAGYSGTQKVEFGIQNNNSTKAANHMHLEGFDQKNLPNDLKHAQDALASTDQRIDDLLEALKIPSSSSLHHEEHVPMNDHIPDFLRDCLDKDVTDNHMMKTNFEHGEACTQLSSGDDDLFDVLGLDFKRKLLNGNWNTLFANETDASAEKHDQKAICKNFPVVGHDNIFPVNEAISGNSIFSGTNTDHLLDAVVSKNQSAANQNSDEMSCRTTVTRISTASVLSPTGMQIMRNHVGQVAPFDFPKTEVKTGAAETSSLISGGSKDNVGNCSQTTSIYGSQLSSWVENSSTNMKRENSVSTGYSKRPDEVSKSNRKRLKPGENPRPRPKDRQMIQDRVKELREIVPNGAKCSIDALLERTIKHMLFLQSVTKHADKLKQTGESKIISKEGGLLLKDNFEGGATWAYEVGSQSMVCPIIVEDLNHPRQMLVEMLCEERGFFLEIADLIRGLGLTILKGVMEARNDKIWARFSVEANRDVTRMEIFMSLVRLLEQTVKGGASSSNAAVDNNMMVYHSIPQST 930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g01426 930 Coils Coil 451 471 - -
Trre8g01426 930 MobiDBLite consensus disorder prediction 262 282 - -
Trre8g01426 930 MobiDBLite consensus disorder prediction 698 743 - -
Trre8g01426 930 MobiDBLite consensus disorder prediction 718 743 - -
Trre8g01426 930 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 728 777 IPR011598 GO:0046983
Trre8g01426 930 MobiDBLite consensus disorder prediction 698 717 - -
Trre8g01426 930 MobiDBLite consensus disorder prediction 218 242 - -
Trre8g01426 930 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 176 IPR025610 -
Trre8g01426 930 CDD bHLH_AtLHW_like 732 801 - -
Trre8g01426 930 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 928 IPR043561 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g01426 Trre-Chr8 10830730 10835695 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g01426 520 911 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 53.071 5.44e-118 373
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g01426 - - aprc:113857443 1280.39