Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre8g01411 | ATGGGTGTCTCAGGGAAATGGATTAGAGCATTAGTTGGTCTAAAGAAATCAGAAAAGACCGGGTCTTCAGAGAAGGATGGGAATAAGGATAGCAAGTCACGCCATCGGAGAAAGCATTCCATCGAAATCGACAATAGCAAACTTCAAAATGAGCTTGATGATGTTGAAGCTACACCTATTGGAGATGCAGATAATGCAATTCCCCAATCAAACCTTGATGTTCATTATTCTCCTTCTACTTCACAACAAGCACATGATACTGGACATAATCATCAAATATCAAGAGAAGAATGGGCTGCGATATGCATTCAAACAGCATTTCGAGGATTTCTGGCCAGAAGAGCGCTACGAGCTTTGAAAGGACTGGTAAGGCTTCAGGCCCTTGTAAGAGGCCATGCAGTAAGAAAACAAGCTGCAATAACTCTCCGTTGTATGCAAGCTTTGGTGAGGGTTCAGGCTCGTGTTCGGGCAAGGCGTGTTCGCTTGTCATTGGAAAGTCAAACAGAACAACAAAAACTTCAGCAACAGCTTGTAAACGAAGCCCGTGTTCGAGAAATTGAAGAAGGTTGGTGTGACAGTGTGGGATCTGTTGAAGAAATTCAATCCAAAATATTAAAGAGACAGGAGGCTGCAGCAAAACGTGAGAGAGCCATGGCATATGCTCTAGCGCATCAGTGGCAGGCAGGATCAAGGCAGCAGGCTGTTTCTTCAGGGTTTGAACCTGATAAAAGTAGTTGGGGTTGGAATTGGTTGGAAAGATGGATGGCTGTACGGCCTTGGGAGAATCGTTTTCTTGACATAAACACGAAAGATGGAGGAAAGGTAGACGAAGATGATGTTATGGATGGTAGAAATGGAATCAGACCTCAGTTCAGGTCTACTAACACGAAATCAAATCCTCCAAATATTCATCCAAGTGTTGCCGGTCATAAAACTGGCCCGTCTGTCTCTGATGGCTGTGATTCTTCTTCCACTGGCAAGTCAGCAGGTTTACTTGAGACATCGAACACACAAGCTGTTAAACCAAAATCTAATACAAATGTTCAAAATCCCGTTGAAGAAACCAACTCAAAATCTGGATTTCCAAGATCTCAAAGTAATCCAAAGGAGAGAAAGTCACAGGTAGATAAACAGGCAAAAAAGCGATTATCACTTCCTAACAATGGGGTTGGTTCCGGGGCTCAAACGGCCAAATATCCTACCAGATCTAACGTGAAAGGGACACGTAGCACGCAAAAGCCTATAAGGGATAAGCCTAAGCCTAAGCCTAAGATCAATGGAGGCGAGGATGTGAGTCTTGCTCAATCTGTTTCACAGCCCACAGTCGTATAA | 1332 | 0.4377 | MGVSGKWIRALVGLKKSEKTGSSEKDGNKDSKSRHRRKHSIEIDNSKLQNELDDVEATPIGDADNAIPQSNLDVHYSPSTSQQAHDTGHNHQISREEWAAICIQTAFRGFLARRALRALKGLVRLQALVRGHAVRKQAAITLRCMQALVRVQARVRARRVRLSLESQTEQQKLQQQLVNEARVREIEEGWCDSVGSVEEIQSKILKRQEAAAKRERAMAYALAHQWQAGSRQQAVSSGFEPDKSSWGWNWLERWMAVRPWENRFLDINTKDGGKVDEDDVMDGRNGIRPQFRSTNTKSNPPNIHPSVAGHKTGPSVSDGCDSSSTGKSAGLLETSNTQAVKPKSNTNVQNPVEETNSKSGFPRSQSNPKERKSQVDKQAKKRLSLPNNGVGSGAQTAKYPTRSNVKGTRSTQKPIRDKPKPKPKINGGEDVSLAQSVSQPTVV | 443 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre8g01411 | 443 | Gene3D | - | 97 | 138 | - | - | |
Trre8g01411 | 443 | MobiDBLite | consensus disorder prediction | 411 | 425 | - | - | |
Trre8g01411 | 443 | MobiDBLite | consensus disorder prediction | 388 | 410 | - | - | |
Trre8g01411 | 443 | ProSiteProfiles | IQ motif profile. | 145 | 172 | IPR000048 | GO:0005515 | |
Trre8g01411 | 443 | ProSiteProfiles | IQ motif profile. | 96 | 124 | IPR000048 | GO:0005515 | |
Trre8g01411 | 443 | ProSiteProfiles | IQ motif profile. | 120 | 147 | IPR000048 | GO:0005515 | |
Trre8g01411 | 443 | MobiDBLite | consensus disorder prediction | 18 | 51 | - | - | |
Trre8g01411 | 443 | MobiDBLite | consensus disorder prediction | 267 | 285 | - | - | |
Trre8g01411 | 443 | MobiDBLite | consensus disorder prediction | 70 | 88 | - | - | |
Trre8g01411 | 443 | FunFam | IQ-domain 11 | 95 | 146 | - | - | |
Trre8g01411 | 443 | MobiDBLite | consensus disorder prediction | 14 | 91 | - | - | |
Trre8g01411 | 443 | MobiDBLite | consensus disorder prediction | 267 | 443 | - | - | |
Trre8g01411 | 443 | PANTHER | IQ-DOMAIN 5-RELATED | 1 | 392 | - | - | |
Trre8g01411 | 443 | MobiDBLite | consensus disorder prediction | 316 | 368 | - | - | |
Trre8g01411 | 443 | SMART | iq_5 | 95 | 117 | IPR000048 | GO:0005515 | |
Trre8g01411 | 443 | SMART | iq_5 | 118 | 139 | IPR000048 | GO:0005515 | |
Trre8g01411 | 443 | MobiDBLite | consensus disorder prediction | 288 | 305 | - | - | |
Trre8g01411 | 443 | Coils | Coil | 38 | 58 | - | - | |
Trre8g01411 | 443 | Pfam | IQ calmodulin-binding motif | 98 | 117 | IPR000048 | GO:0005515 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre8g01411 | Trre-Chr8 | 10614487 | 10620167 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre8g01411 | 1 | 418 | IQD Protein Family | AT3G22190 | 54.118 | 1.17e-118 | 351 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre8g01411 | - | - | tpra:123923158 | 760.755 |