Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g01390 ATGTCCAAAACTATAGTGGATGAATGTCGTGGTGTTCTTCATGTCTATAGCGACGGTTCAATAGTTCGAAAGTTAAACCCAGCTTTCAACATCCCAGTTGAAGAAAACGGCACCGTTTTATGGAAAGATGTTGTTTTTGACTCAGCTCATAATCTTCACCTTCGGCTCTATAAGCCAGCTAATGCAACAAACTCGAAGCTTCCAATTTTTTACTACATTCATGGTGGCGGCTTCTGTATCGGCTCGCGGACATGGCCAAATTGTCAAAATTATTGCTTCAAGCTCGCTTTGCAGCTTCAAGTTGTGGTGGTTGCTCCTGATTATCGGCTTGCACCGGAGAATCGGCTACCAAGTGCAATTGATGATGGTTTTATGGCTGTTAAATGGCTTCAAGAAGAAGCTTTGAGTAGTGAGCCGGATCCTTGGTTGAGCCATGTGGCTGATTTTAGCCGGGTTTTTATTTCGGGTGACTCGGCTGGTGGTAATATAGCTCATCATTTGGCGGTTCGGCTTGGGCTTGGGTCCACCGAGTTGGAACCAGTTCGGGTTAGGGGTTATGTTTTGTTGGCGCCGTTTTTTGGTGGAACAGTTCGGACTAAGTCAGAAGCTGAAGGACCAAATGATGCTTTTCTCAACTTAGAACTTATTGACAGGTATTGGAGGCTTTCAATATCCATTGGGGAGAATACTGATCACCCACTAGTGAATCCATTTGGACCTCATAGTAAGAGCCTTGAAGAAATTGATCTTGACCCAATTCTAGTGGTGGTTGGGGAAAATGATTTACTTAAAGATAGGGTAGAGGATTATGCAAGGAGGCTTAAGAATTGGGGTAAGAATATTGAGTATGTAGAATTTAAAGGACAACAACATGGGTTCTTTACTATTGATCCAAATTCCGAACCATCAAAAGAGTTGATGTTGGTCATCAAACAATTCATAGAGAAGAATTAA 954 0.4245 MSKTIVDECRGVLHVYSDGSIVRKLNPAFNIPVEENGTVLWKDVVFDSAHNLHLRLYKPANATNSKLPIFYYIHGGGFCIGSRTWPNCQNYCFKLALQLQVVVVAPDYRLAPENRLPSAIDDGFMAVKWLQEEALSSEPDPWLSHVADFSRVFISGDSAGGNIAHHLAVRLGLGSTELEPVRVRGYVLLAPFFGGTVRTKSEAEGPNDAFLNLELIDRYWRLSISIGENTDHPLVNPFGPHSKSLEEIDLDPILVVVGENDLLKDRVEDYARRLKNWGKNIEYVEFKGQQHGFFTIDPNSEPSKELMLVIKQFIEKN 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g01390 317 Coils Coil 260 280 - -
Trre8g01390 317 Pfam alpha/beta hydrolase fold 71 294 IPR013094 GO:0016787
Trre8g01390 317 Gene3D alpha/beta hydrolase 8 316 IPR029058 -
Trre8g01390 317 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 152 164 IPR033140 -
Trre8g01390 317 PANTHER ARYLACETAMIDE DEACETYLASE 9 298 - -
Trre8g01390 317 SUPERFAMILY alpha/beta-Hydrolases 12 316 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g01390 Trre-Chr8 10463140 10464642 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g01390 5 315 Carbohydrate Esterase AT5G16080 33.746 7.77e-55 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g01390 - - aprc:113858789 526.554