Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g01389 ATGTCCAAAACTATAGTGGATGAATGTCGTGGTGTTCTTCATGTCTATAGCGACGGTTCAATAGTTCGAAAGTTAAACCCAGGCCCAGCTTTCAACATCCCAGTTGAAGAAAACGGCACCGTTTTATGGAAAGATGTTGTTTTTGACTCAGCTCATAATCTTCACCTTCGGCTCTATAAGCCAGCTAATGCAACAAACTCCAAGCTTCCAATTTTTTACTACATTCATGGTGGTGGCTTCTGTATCGGCTCGCGGACATGGCCAAATTTTCAAAATTATTGCTTTAAGCTCGCTTTGCAGCTTCAAGTTGTAGTGGTTGCTCCTGATTATCGGCTTGCGCCGGAGAATCGGCTACCAAGTGCAATTGATGATGGTTTTATGGCTGTTAAATGGCTTCAAGAAGAAGCTTTGAGTAGTGAGCCGGATCCTTGGTTGAGCCATGTGGCTGATTTTAGCCGGGTTTTTATTTCGGGTGACTCGGCTGGTGGTAATATAGCTCATCATTTGGCGGTTCGGCTTGGGCTTGGGTCCACCGAGTTGGAACCAATTCGGGTTAGGGGTTATGTTTTGTTGGCGCCGTTTTTTGGTGGAACAGTTCGGACTAAGTCAGAAGCTGAAGGACCAAATGATGCTTTTCTCAACTTAGAACTTATTGACAGGTATTGGAGGCTTTCAATACCCATTGGGGAGAATACTGATCACCCACTTGTGAATCCATTTGGACCTCATAGTAAGAGCCTTGAAGAAATTGATCTTGACCCAATTCTAGTGGTGGTTGGGGAAAATGATTTACTTAAAGATAGGGTAGAGGATTATGCAAGGAGGCTTAAGAATTGGGGTAAAAATATTGAGTATGTAGAATTTAAAGGACAACAACATGAGTTCTTTACTATTGATCCAAATTCCGAACCATCAAAAGAGTTGATGTTGGTCATCAAACAATTCATAGAGAAGAATTAA 960 0.4219 MSKTIVDECRGVLHVYSDGSIVRKLNPGPAFNIPVEENGTVLWKDVVFDSAHNLHLRLYKPANATNSKLPIFYYIHGGGFCIGSRTWPNFQNYCFKLALQLQVVVVAPDYRLAPENRLPSAIDDGFMAVKWLQEEALSSEPDPWLSHVADFSRVFISGDSAGGNIAHHLAVRLGLGSTELEPIRVRGYVLLAPFFGGTVRTKSEAEGPNDAFLNLELIDRYWRLSIPIGENTDHPLVNPFGPHSKSLEEIDLDPILVVVGENDLLKDRVEDYARRLKNWGKNIEYVEFKGQQHEFFTIDPNSEPSKELMLVIKQFIEKN 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g01389 319 Coils Coil 262 282 - -
Trre8g01389 319 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 154 166 IPR033140 -
Trre8g01389 319 PANTHER ARYLACETAMIDE DEACETYLASE 9 300 - -
Trre8g01389 319 SUPERFAMILY alpha/beta-Hydrolases 13 318 IPR029058 -
Trre8g01389 319 Gene3D alpha/beta hydrolase 13 319 IPR029058 -
Trre8g01389 319 Pfam alpha/beta hydrolase fold 73 296 IPR013094 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g01389 Trre-Chr8 10456495 10458003 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g01389 5 317 Carbohydrate Esterase AT5G16080 34.663 1.78e-56 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g01389 - - aprc:113858789 516.924