Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g01363 ATGGGTGTGATTAAATCAGCCATAGGAGATGCAATTTTAACATCAATATTTGTTTTCTTCATTTCAACATTAAGACTTCTCTCTACAAAAACATCCTTATTCCTTAATCTTGAACCAGTTTCACTACCTGGCTTATTCATCACAACAATCTTAAACACAATAATCATTCTCACAATAAGCCTCATTGGAAGAATCTTAGGTGGAGCTAGCTTCAACCCATCATCAACAATTTCCTTCTACACATTAGGACTAAGACCCAATTCATCTCTTCTATCATTGGCCATTACATTTCCAGCTCAAGCAATAGGCGCCGCGTTCGGTATCAAAACAATCCTTCAAGTTATGCCAAATGAGTACAAACACATGATGAAAGGTCCTTCTTTGAAAGTTGATTTACATACAGGAGCTATAGTTGAAGGACCTTCTATGAACCCTGCTAATGCATTTGGTTGGGCTTATATGAATAATAAGCATAATACTTGGGAGCAATTTTATGTTTTTTGGATTTGTCCTTTAATTGGGGCTAGTTCTGCTGCTTTGGTATATCGTTTTGTGTTTATGTCACCAATTAAGGAGAAGAAAGCTTGA 588 0.3622 MGVIKSAIGDAILTSIFVFFISTLRLLSTKTSLFLNLEPVSLPGLFITTILNTIIILTISLIGRILGGASFNPSSTISFYTLGLRPNSSLLSLAITFPAQAIGAAFGIKTILQVMPNEYKHMMKGPSLKVDLHTGAIVEGPSMNPANAFGWAYMNNKHNTWEQFYVFWICPLIGASSAALVYRFVFMSPIKEKKA 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g01363 195 Pfam Major intrinsic protein 132 182 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trre8g01363 195 PRINTS Major intrinsic protein family signature 165 185 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trre8g01363 195 PRINTS Major intrinsic protein family signature 125 147 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trre8g01363 195 PRINTS Major intrinsic protein family signature 5 24 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trre8g01363 195 SUPERFAMILY Aquaporin-like 3 189 IPR023271 -
Trre8g01363 195 Gene3D Glycerol uptake facilitator protein. 137 194 IPR023271 -
Trre8g01363 195 PANTHER AQUAPORIN SIP1-1 139 194 IPR044222 GO:0015250
Trre8g01363 195 Gene3D Glycerol uptake facilitator protein. 1 136 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g01363 Trre-Chr8 10259509 10260228 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g01363 1 186 Major Intrinsic Protein MIP AT3G04090 38.696 9.50e-41 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g01363 K09875 - gmx:100797126 247.284