LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trre8g01318	ATGGGAGGCCAAAGTTGCATTAAGGTTCTGATTATTTGTCTTATAGCAATAGTTGGAGTAACTCAAGCTCAGTTGCAGCTGGGTTTCTATGCTAAAAGCTGTCCAAAAGCTGAGCAAATTATTTTGAAGTATGTTCATGAACATATTCCAAATGCACCATCACTAGCAGCTGCACTCATAAGAGTACATTTCCATGACTGTTTTGTTAGGGGATGTGATGCATCTGTTCTTTTGAACTCAACACAAAACAATCAAGCTGAAAAGAACTCTATTCCAAATCTTTCACTTAGAGGTTTTGATTTCATTGACGCAATAAAGAGTCTTGTTGAAGCTGAATGCCCCGGTGTTGTTTCTTGTGCTGATATATTGACTTTGGCCGCTAGAGATTCTATTCATGCCATTGATGGACCTTTTTGGAATGTACCAACTGGTCGAAGGGATGGTGTCATATCTAAAGCATCAGATGTATTTCTTACCCTTCCAGCTCCATTTCACAACCTCACCACTCTCCTAACACTCTTTGGCAATGTTGGACTTGATGCAACTGATTTGGTCTTGCTTTCTGGAGCACACACAATTGGTATTACACATTGCGGAACCGCAACAGTATCAAACCGGTTGTATAATTTTACCGGCAAGGGTGATCAAGATCCAGATCTAGACAGCGCATATGCTAAAAATTTGAAAACCAATAAGTGTAAGAGTATCAATGATCAAACCACAATTCTTGAAATGGATCCCGGAAGTCGCAATACATTTGATCTTGGCTATTACAAGCAACTAGTTAAGAGAAGGGGTTTGTTTCAATCAGATGCTGCATTGCTTAAAAGCTCTACAACAAGATCTATTGTTGCACAACATCTTCAATCAACTGAAAAATTCTTTGTTGAATTTGCTAAGTCTATGGAGAAAATGGGAAGAATTAATGTCAAGATTGGGACTGAAGGAGAGATTAGGAAGCAGTGTGCATTTGTTAATTAA	981	0.3863	MGGQSCIKVLIICLIAIVGVTQAQLQLGFYAKSCPKAEQIILKYVHEHIPNAPSLAAALIRVHFHDCFVRGCDASVLLNSTQNNQAEKNSIPNLSLRGFDFIDAIKSLVEAECPGVVSCADILTLAARDSIHAIDGPFWNVPTGRRDGVISKASDVFLTLPAPFHNLTTLLTLFGNVGLDATDLVLLSGAHTIGITHCGTATVSNRLYNFTGKGDQDPDLDSAYAKNLKTNKCKSINDQTTILEMDPGSRNTFDLGYYKQLVKRRGLFQSDAALLKSSTTRSIVAQHLQSTEKFFVEFAKSMEKMGRINVKIGTEGEIRKQCAFVN	326

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trre8g01318	326	Gene3D	Peroxidase, domain 2	161	305	-	-
	Trre8g01318	326	Gene3D	-	28	326	-	-
	Trre8g01318	326	ProSitePatterns	Peroxidases proximal heme-ligand signature.	183	193	IPR019793	-
	Trre8g01318	326	PRINTS	Haem peroxidase superfamily signature	56	70	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Trre8g01318	326	PRINTS	Haem peroxidase superfamily signature	117	134	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Trre8g01318	326	PRINTS	Haem peroxidase superfamily signature	246	261	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Trre8g01318	326	PRINTS	Haem peroxidase superfamily signature	183	198	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Trre8g01318	326	PRINTS	Haem peroxidase superfamily signature	135	147	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Trre8g01318	326	Pfam	Peroxidase	45	288	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Trre8g01318	326	SUPERFAMILY	Heme-dependent peroxidases	24	326	IPR010255	GO:0004601\|GO:0006979\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Trre8g01318	Trre-Chr8	9776984	9779039	Dispersed/Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Trre8g01318	9	326	Peroxidase	AT4G11290	61.562	3.06e-148	418

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trre8g01318	K00430		-	gmx:100785662	525.013

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