Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g01300 ATGGGTGATGGTGGCGTGGCGTGCATGCCTTTGCAGCAGCAGCAGCAACAACAGCAACATGTTATTGAGAAGTTGCCGAATGCTGGGGAGGAAGCTGGTTGCGAAGGGAAGAGTGAGAATGGTTTTAGTTCTGAAGTGGTTAAGGCTCCTGAAAAGAAGAAGGTGAGGAAGGTGATAAAGAAGGTGGTGAAAAAAGTAAAGAAGAAAGTAGTGGCTGGGACGAAGAAGGCTGTAACTGTGAAAGGAGAATTGGTTTTGGATAGAGTGAGCAGCAATGGTGTTGAGAGTGGCGAAATATGTGGTGGGCAGAAAGAAGAAGTGGAAGAGGGTGAATTGGGGACTTTGAAGTGGCCGGGGAGTGAACTGGAGAATGGAGAGTTTTTGTCTGAGAAGCTGCCTCCGCCACCACCGCCGCCACCACCACCACCTCCGCGGAGTAGTGAAATTGAAAATGGGGATATTGTCGGTGAGAGGTGGAAAAAAGTGCAGGTGGAGAAGGGAGAGGTTGATAATTGGAGAAAAGAGGAGATAGTTTCTGAGAAGAGCTGGAAAGGAGAAGGTGAGAAAGGAGCGTATGGGTCATGGAGAGGTGGTATAAAGGGTGATGTTGAGAAGGGAGAATTCATTCCAGATAGGTGGCATAGGGGAGACACGGGGAAGGATGATTATGGGTACGGTAGAATCAACAGGTACGAGTCATATAGGGACAAAGGGTGGAAAACTGAACGTGACGTGGAATGCACATCGTCTTCTGGTAGGTATGCAAGTAATGATTATTTTAGGAAGAAGGATTTTAATAGAAGTGGTAGTCAACATGTGAAAAGTGCACCCAGGTGGGAGAGTGGACAGGAAAGAAATGTAAGGATCAGTTCAAAGATCGTGGATGAGGAGAAATATGAAGACAATGGTAGGATACATCCACGGGATTACTCTTCCGGAAGTCGTTTGAAGAGGCATGTCAATGATTCAGATGGTTGGGAGCGGAAGCAGTATGGAGATTATGCTGGTTTCAAAAGTCGAAGGGTATCTGATGATGGCTCACGCCATGTTTATTCAGAGCACCGTGTTTCTTCAGAGCACTATTCTCGTCTTTCTGTGGAGAGATCTTACAGAAATAGTTCTTCAAAGTTACCTGTCGACAAATATTCTTCTAAACATCATGAATCTTTGCCTATCAGATTGGCTTATGATAAACATGGATGCAGTCCTGGTCATTCTGGAAGATCCCCACATGATCGAGCTAGATATTATGATAATAAAGATCACGCTCCTGCCCGTCGGTCACCGTATGGCTGTGACAGATCTCTATATAGCCGTGAGAAGTCACCACATGGCCGTGACAGATCTCCATATAGCCGTGAGAAGAATTGGGATAGAAGCCGGCACCGTGATCATAAATTAAGAAGTCCTACTCATGCTGAGCGGTCCCCACAAAATCGAGGTCGGCAACGTGGTTGCAGGGATCAGACTCCAAACTTGATAGAGCAATCCCCACTTGATCGAACAAGAGAAAATATTGATCGAGAAACGAGTAATAAACCCTTATCAAGCGAAAAACATAACTTACAATATAGCTGTAAAAATTCCGAAAACAAGAATATTCAAAAGGAGTCAAATCTTTCAGGTATAGAATCTCAAGGTGAAAGAAACGTACATCATGCTAATGGGTCTGTTGAGAAAGGTGTCTGTGATGAAACTGAAAAGGAACAAAAGTCCTGCAGCCCAGCTGTAAACTGCAAAGATTCTCCTTGCTTGCAGCTACCTCCCGAGGAGCAGCCTTTTATGGAAGAGGATATGGAAGAAGATATGGACATATGTGATACTCCTCCACATGTTCCTGTGGTTGCTGATTCATCAATAGGAAAATGGTTTTATCTTGATTATTATGGTGTAGAACACGGTCCTTCTAAATTGTCCGACATCAAGGTTCTTGTCGATGATGGTGTACTAATGCCAGATCACTTTATTAAGCACATAGATAGTGACAGGTGGTTAACTGTTGAAAATGCGGCATCACCATTGGCAGCTCAGAGTTTTCCATTGATTGTGTCAGACACCATAACCCAGCTTGTAAACCCTCCAGAAGCTCCTGGTAATCTTTTGTCAGACACTGGTGATATTCTTCAAACTGGACCTGAGAATTATCAGGAAAGGCAATCCCCTTCCCTGCAGTCAAAGTTATGCCCTGATGACAGTGTGCTTGCACCTGAGCTGTTGGAGGACAGCCGCTTTGATGAAAGGGTTGGTGTTCTGTTAGAAGGTTATGATGTCATTCCTGGAAGGGAGCTTGAAGCAATAACAGAAGCTTTGCAAATGAGTTTTGAATATGCAGAGTGGGACGATTTGGGAGACTACAAAGGTTTTCCAGGGCTTGATACTTGCCCGAGCATGGACCATGATTCTAAAATTGATTTTGCATCAAGTGAGCAAGAGTCCCAGTTAATGATGCCCTCCGACAAGGATATTGGCGTTCCCCTTGGTGTTCCTGATGACTGGTTTTCTGCTCGTTGGTCATGCAAAGGCGGTGACTGGAAGAGGAATGATGACTCCCAAGATAGATATTGTAAAAAGAAACTGGTCCTAAATGATGGGTTTCCATTATGCCAAATGCCAAAGTCTGGATGTGAAGATCCTCGGTGGTCTAGCAAAGATGACTTGTATTATCCATCTTATAGCAGGAAGCTTGACATTCCTCTTTGGGCTTTTTGTACAGATGAGTTGGTTGATTGTGGTGCTGTAAGCAGGGCAATTCAAAGTAAGTTTGGTTCTGTTAGAGGAGTGAAAGGAAATGTTCATTCAGTGGTCAGGATAAATTCATGTGTGGTCAAGGACCAGGGATCATTGGTTTCCGAGTCACACCACAAGACCCAAGACAAGGATAGACATCGTTCACGGTCAGCCCGACCTTTCTCTTCAATCAGTGATAGCAAGAAATCATCAGCTGAAGAGGATTCCCAGTCAAAAACTGTTAATGATCAAGGTTCTCAAGGCTATTGCAGGAGTGAAGAAATCGTTAATATTTCTCAAGACCATCTCTGTGCTGTCAATGACTTGCAGTTGCATTTGGGTGACTGGTATTATCTTGATGGTTCGGGGCGCGAAAGAGGGCCTTCATCATTTTCAGATCTACAGTCTTTAGTAGACCAGGGAATTTTGAAGAAGTATAGCAGTGTATTCAGGAAATGTGATAAACTCTGGGTTCCTGTTACTTCTTCCACAGAAACTTATGATGTTAATCTCAAGAGCCACCAAGAAAGCAGTTCAGTGTCTGGTGAATTTTCAGGACTTCGATCAGTACAATCTCAAGGTGTTTCATTTGGTGAACCTCATTCAAAGTCAAATATGTTTAACAGCTTATACCCCCAGTTTGTTGGTTATACTCGCGGGAAACTACATGAATTGGTAATTAAATCATACAAGAGCCGGGAATTTGCTGCAGTAATAAATGAGGTTTTAGATCCTTGGATCAATGCAAGACAGCCAAAAAAGGAAATTGAGAAACAAATATATTGGAAATCAGAAGGTGATGGACATGCTTCCAAAAGGGCTCGAGTGCTGCTTGATGACAGTGAAGAAGAAAGTGATTTTGTAGATGACAGCTTTATTATTGAGAACGACAAATCCACTCTTGAGGCTCTGTCTGGTGATGTTACTTTCTCTACAGAAGAAAGTGGCATTAATGTTTCCAAGGAGGGAAGATGGGGCTTATTGGATGGTCCAATGTTGGCACGAGTCTTCCACTTCTTGAGGTCTGATTTGAAGTCCCTCGTCTTTGCGTCCATGACATGCAAGCATTGGAAAGCGTCTGTAAACTTTTACAAAGAAGTCTCGAGAAATATCAACTTGTCATCCCTTGGTCATTCTTGCACGGATTCCATACTTTGGAACATTGTGAATACTTATGAGAAAGACAAGATCAAATATATGATTCTAATGGGTTGCACCAATATTACTGCTGACATGCTAGAGAAAATTCTTCTTTCAGTTTCTGGTTTATCTACAGTAGACATTAGAGGGTGCAATCAGTTTGAGGAGCTGACTTCTAAATTTACCAATTTGAAATGGATCAAGAGCCGAAATTCTCGCATAACTAAAATTGCAGATGAGTCACATAAAATCAGAAGCCTCAAGCAGATTAGTGATCATTCTCTGTCCGGTTCTAAGGCCAGTAGTTTAGGTATTAGGGATGATTTTGGTGAGCTGAAGGTTTATTTTGATAGTGTGGACAAGAGAGACACAGCGAAGCAATTATTCCGTCAAAACTTATACAAGCGTTCAAAATTATATGATGCTAGAAAGTCCTCTTCCATTCTCTCTAGAGATGCTCGTACAAGACGATGGTCAATTAAGAAATCTGAAAGTGGTTACAAAAGGATGGAGGAATTTCTTGCTTCAAGACTGAGGGAAATTATGAAGGCAAATGCGTGTGACTTTTTTGTGCCCAAGGTTGCAGAAATTGAGGCTAAAATGAAAAGAGGTTATTACAATGGACATGGGTTGAGCTCTGTGAAGGAGGACATAAGAAGAATGTGCCGTGATGCAATGAAGGCAAAGAATCGTGGTGATGCTAATGATATGAATCATGTTATCTCATTATTTATTCAGCTTGCAACAAGATTGGAGGAGAGTTCTAAATATGTGAATGACAGGGATGCACTTTTGAAGTTATGGGGAAATGACTTACCCTTGGCATTGTGTTCTAGTTCTTCCAAGTACAAGAAGAATAGATTAGTGACCGACAGAAAGTATAGAAGTGATGACATACATGGTGGTTTGGATAATGGACAGTATGCTTCTGATAGAGAACTCAGAAGGCGTTTATCAAAATTGAATAAGAAATCTATGGACTCAGAGAGTGACACATCTGATGACCTTGATAGGTCTTCTGAAGATGGCAATAGTGATGGGGATAATTCAACCTCCGGTACTGATAGTGACCAAGAAGTTCGTTTAGAGAGTCGAACCAGGGAGTCAAAAGGAAATGGATACTTCACACCTAATGATGGGTTGGATTTCATTACTGATGAGCGTGAATGGGGAGCTCGTATGACGAAAGCAAGTCTGGTTCCTCCTGTTACTCGGAAATATGATGTCATTGATCAATATGTCATTGTCGCTGATGAGGATGATGTGAAAAGGAAGATGCGGGTTTCATTACCAGATGACTATGCAGAGAAGTTGACTGCACAAAAGAATGGCACTGAGGAGTCTGATATGGAACTTCCTGAAGTCAAGGGTTACAAACCTAGAAAAATGCTTGAACATGAGGTCGTTGAGCAAGAGGTTTATGGAATTGATCCCTATACACACAATCTTTTACTTGATTCTATGCCAGATGAATTAGATTGGTCTCTACAAGAGAAGCACATGTTTATAGAAGACACACTCCTCCGGACATTGAATATGCAAGTTAGGCATTTTACTGGAACTGGAAGCACTCCAATGAGCTACGCTTTGCAGCCTGTTATCCAAGAGATTGAAAGGAGTGCAGTGGAGCACTGTGACACAAGAATGAGCAATATGTGTCAAGGTATCCTAAAAGCCATAGACAGACGTCCTGATGACAAATATGTAGCTTATAGGAAGGGACTTGGTGTTGTTTGCAATAAGGAAGAAGGCTTTGGTGAAGATGATTTTGTTGTGGAGTTTCTTGGAGAGGTGTATCCGGTGTGGAAGTGGTTTGAGAAACAAGATGGGATACGATCTCTGCAAAAAAACAGCAAAGATCCAGCACCAGAATTTTATAACATATACCTTGAGAGGCCAAAGGGTGATGCTGATGGTTATGACTTAGTTGTTGTTGATGCCATGCATAAAGCTAACTATGCCAGTCGAATATGTCATTCATGCCGACCTAATTGTGAAGCAAAAGTTACTGCTGTAGGTGGTCATTATCAAATTGGTATTTATAGTGTTCGTAAAATTCAGCATGGTGAGGAGATCACTTTTGATTACAATTCTGTTACAGAGAGCAAGGAGGAATATGAAGCATCAGTCTGTTTATGCGGAAGCCAAGTTTGCCGTGGGAGCTATCTAAATCTGACTGGTGAAGGGGCTTTCCAAAAGGTACTGAAGGAATGGCATGGGATTCTTGATTGTCATTATTTGATGCTAGAAGCTTGTGAATTAAACTCTGTTTCTGAAGAGGACTATAATGACCTGGGAAGAGCGGGTTTAGGAAGTTGTTTGCTTGGAGGCTTGCCAGATTGGCTAGTTGCTTATGCGGCTCGCCTTGTGAGATTTATTAATTTTGAAAGAACAAAACTTCCTGAGGCAATTCTAAAGCATAATTTGGAAGAAAAAAGAAAATATTTTTCAGATATATGTCTTGAAGTTGAGAGGAGTGACGCAGAGGTTCAGGCTGAGGGTGTATACAACCAGAGGCTTCAGAATCTTGCAGTCACTCTTGATAAGGTAAGGTATGTCATGAGATGTATATTTGGTGATCCAATGAAAGCTCCACCTCCTCTTGAGAAGCTCAGTCCTGAAGCAGTTGTTTCGTTCCTCTGGAAAGGAGAGGATTCATTTGTTGAGGAGCTTCTTCAGTGCATGACCCCTCATGTGGCAGAATCTACCTTGAATGATCTCAAGTCCAAAGTTCGCGCTCGTGATCCTTTGAGTTCTAAAGATATTCAGAAAGCGGTTCAAAAATCTCTGTTGTGGTTGAGAGATGAGGTTCGAAATATTCCTTGTACATACAAATGTCGGCATGATGCTGCTGCTGACTTAATCCATATTTATGCCTATACCAAGTACTTCTTTAGAGTAGTGGATTATAAATCTATTACTTCACCACCTGTCTATATTAGTCCACTTGACTTAGGTCCCAAGTGTGCCGACAAATTGGGGGCAGGATTGCAGGAGTATCGGAAGATATATGGTCAAAATTATTGTTTAGGGCAACTGATATTTTGGCATAATCAGAGTGATGGGGAGCCTGATTGTACCCTGGCTAGAGCCAGCAGGGGTAGCTTGTCATTGCCAGACGTCAGTTCCTTTTATGCCAAGGCTCACAAGCCTTCACGGCAACGTGTTTATGGTCCAAAGACTGTAAAATCTATGTTGGCAAGAATGGAGAAGCATCCCCAGAGACCTTGGCCTAAAGACCAGATTTGGTCATTCAAAAGTAGTCCTAAATTTTTTGGTAGCCCAATGTTAGACGCTGTAATTAATAATACTCCACTGGATAGAGATATGGTTCACTGGTTGAAGCACAGACCTGCTATATTCCAGGCCATGTGGGACCAGTGA 7251 0.4223 MGDGGVACMPLQQQQQQQQHVIEKLPNAGEEAGCEGKSENGFSSEVVKAPEKKKVRKVIKKVVKKVKKKVVAGTKKAVTVKGELVLDRVSSNGVESGEICGGQKEEVEEGELGTLKWPGSELENGEFLSEKLPPPPPPPPPPPPRSSEIENGDIVGERWKKVQVEKGEVDNWRKEEIVSEKSWKGEGEKGAYGSWRGGIKGDVEKGEFIPDRWHRGDTGKDDYGYGRINRYESYRDKGWKTERDVECTSSSGRYASNDYFRKKDFNRSGSQHVKSAPRWESGQERNVRISSKIVDEEKYEDNGRIHPRDYSSGSRLKRHVNDSDGWERKQYGDYAGFKSRRVSDDGSRHVYSEHRVSSEHYSRLSVERSYRNSSSKLPVDKYSSKHHESLPIRLAYDKHGCSPGHSGRSPHDRARYYDNKDHAPARRSPYGCDRSLYSREKSPHGRDRSPYSREKNWDRSRHRDHKLRSPTHAERSPQNRGRQRGCRDQTPNLIEQSPLDRTRENIDRETSNKPLSSEKHNLQYSCKNSENKNIQKESNLSGIESQGERNVHHANGSVEKGVCDETEKEQKSCSPAVNCKDSPCLQLPPEEQPFMEEDMEEDMDICDTPPHVPVVADSSIGKWFYLDYYGVEHGPSKLSDIKVLVDDGVLMPDHFIKHIDSDRWLTVENAASPLAAQSFPLIVSDTITQLVNPPEAPGNLLSDTGDILQTGPENYQERQSPSLQSKLCPDDSVLAPELLEDSRFDERVGVLLEGYDVIPGRELEAITEALQMSFEYAEWDDLGDYKGFPGLDTCPSMDHDSKIDFASSEQESQLMMPSDKDIGVPLGVPDDWFSARWSCKGGDWKRNDDSQDRYCKKKLVLNDGFPLCQMPKSGCEDPRWSSKDDLYYPSYSRKLDIPLWAFCTDELVDCGAVSRAIQSKFGSVRGVKGNVHSVVRINSCVVKDQGSLVSESHHKTQDKDRHRSRSARPFSSISDSKKSSAEEDSQSKTVNDQGSQGYCRSEEIVNISQDHLCAVNDLQLHLGDWYYLDGSGRERGPSSFSDLQSLVDQGILKKYSSVFRKCDKLWVPVTSSTETYDVNLKSHQESSSVSGEFSGLRSVQSQGVSFGEPHSKSNMFNSLYPQFVGYTRGKLHELVIKSYKSREFAAVINEVLDPWINARQPKKEIEKQIYWKSEGDGHASKRARVLLDDSEEESDFVDDSFIIENDKSTLEALSGDVTFSTEESGINVSKEGRWGLLDGPMLARVFHFLRSDLKSLVFASMTCKHWKASVNFYKEVSRNINLSSLGHSCTDSILWNIVNTYEKDKIKYMILMGCTNITADMLEKILLSVSGLSTVDIRGCNQFEELTSKFTNLKWIKSRNSRITKIADESHKIRSLKQISDHSLSGSKASSLGIRDDFGELKVYFDSVDKRDTAKQLFRQNLYKRSKLYDARKSSSILSRDARTRRWSIKKSESGYKRMEEFLASRLREIMKANACDFFVPKVAEIEAKMKRGYYNGHGLSSVKEDIRRMCRDAMKAKNRGDANDMNHVISLFIQLATRLEESSKYVNDRDALLKLWGNDLPLALCSSSSKYKKNRLVTDRKYRSDDIHGGLDNGQYASDRELRRRLSKLNKKSMDSESDTSDDLDRSSEDGNSDGDNSTSGTDSDQEVRLESRTRESKGNGYFTPNDGLDFITDEREWGARMTKASLVPPVTRKYDVIDQYVIVADEDDVKRKMRVSLPDDYAEKLTAQKNGTEESDMELPEVKGYKPRKMLEHEVVEQEVYGIDPYTHNLLLDSMPDELDWSLQEKHMFIEDTLLRTLNMQVRHFTGTGSTPMSYALQPVIQEIERSAVEHCDTRMSNMCQGILKAIDRRPDDKYVAYRKGLGVVCNKEEGFGEDDFVVEFLGEVYPVWKWFEKQDGIRSLQKNSKDPAPEFYNIYLERPKGDADGYDLVVVDAMHKANYASRICHSCRPNCEAKVTAVGGHYQIGIYSVRKIQHGEEITFDYNSVTESKEEYEASVCLCGSQVCRGSYLNLTGEGAFQKVLKEWHGILDCHYLMLEACELNSVSEEDYNDLGRAGLGSCLLGGLPDWLVAYAARLVRFINFERTKLPEAILKHNLEEKRKYFSDICLEVERSDAEVQAEGVYNQRLQNLAVTLDKVRYVMRCIFGDPMKAPPPLEKLSPEAVVSFLWKGEDSFVEELLQCMTPHVAESTLNDLKSKVRARDPLSSKDIQKAVQKSLLWLRDEVRNIPCTYKCRHDAAADLIHIYAYTKYFFRVVDYKSITSPPVYISPLDLGPKCADKLGAGLQEYRKIYGQNYCLGQLIFWHNQSDGEPDCTLARASRGSLSLPDVSSFYAKAHKPSRQRVYGPKTVKSMLARMEKHPQRPWPKDQIWSFKSSPKFFGSPMLDAVINNTPLDRDMVHWLKHRPAIFQAMWDQ 2416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g01300 2416 Gene3D SET domain 1832 2017 IPR046341 -
Trre8g01300 2416 MobiDBLite consensus disorder prediction 516 552 - -
Trre8g01300 2416 SMART set_7 1852 1992 IPR001214 GO:0005515
Trre8g01300 2416 MobiDBLite consensus disorder prediction 95 157 - -
Trre8g01300 2416 MobiDBLite consensus disorder prediction 948 968 - -
Trre8g01300 2416 MobiDBLite consensus disorder prediction 130 147 - -
Trre8g01300 2416 MobiDBLite consensus disorder prediction 703 727 - -
Trre8g01300 2416 Pfam SET domain 1931 1986 IPR001214 GO:0005515
Trre8g01300 2416 MobiDBLite consensus disorder prediction 696 727 - -
Trre8g01300 2416 MobiDBLite consensus disorder prediction 948 995 - -
Trre8g01300 2416 MobiDBLite consensus disorder prediction 338 366 - -
Trre8g01300 2416 MobiDBLite consensus disorder prediction 1609 1669 - -
Trre8g01300 2416 MobiDBLite consensus disorder prediction 298 321 - -
Trre8g01300 2416 MobiDBLite consensus disorder prediction 380 394 - -
Trre8g01300 2416 MobiDBLite consensus disorder prediction 404 482 - -
Trre8g01300 2416 MobiDBLite consensus disorder prediction 338 562 - -
Trre8g01300 2416 MobiDBLite consensus disorder prediction 483 499 - -
Trre8g01300 2416 MobiDBLite consensus disorder prediction 1 21 - -
Trre8g01300 2416 Pfam Protein SET DOMAIN GROUP 2 C-terminal 1997 2416 IPR045606 -
Trre8g01300 2416 MobiDBLite consensus disorder prediction 500 515 - -
Trre8g01300 2416 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR3 163 2416 - -
Trre8g01300 2416 MobiDBLite consensus disorder prediction 1609 1633 - -
Trre8g01300 2416 ProSiteProfiles SET domain profile. 1843 1986 IPR001214 GO:0005515
Trre8g01300 2416 SUPERFAMILY SET domain 1861 2009 IPR046341 -
Trre8g01300 2416 CDD SET_SETD2-like 1860 2008 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g01300 Trre-Chr8 9616806 9633932 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Trre8g01300 SET 5.9e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g01300 K22748 - gmx:100781921 3715.62