Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g01284 ATGTGTTTAGCAGGAGATACTTTGAAAGTAGGCCAGAAGATAATAGACAATGAAAATGAAACTAACCTTGTTTCAGCTGGAAAAATATTTGAACTAGGCTTTTTCTCTGCTGGTGAACAAAGATACTTAGGTATATGGTATCACATACCAGAAGGGTCAGAACAATCTCAAAAACAAACAGTTGTGTGGGTTGCAAACAGAGACCATCCTGTAGCTGTTGATTCAACTGGAGTTTTTCAAATAGCAGAAGATGGAAATCTTGTGGTTGTAGACACATCCAGTAATAATATTACATACTGGTCTTCCAATTCCACAGTCAAAGACTCTTCTAACTCTTCATCTCAAAACAGGACATTGAAACTTATGGATTCTGGTAACCTTGTGTTACTAGATGATAGGAATTTGAAACTATGGCAGAGCTTTGAAAATCCATCTGACACATTCCTACTAGGTATGAAGATGGATACGAATTTGAAATTGACCAGTTGGAAAAGTGCTGATGATCCAGGAAGTGGGAATTTCACTTTTAAGATGGAGGACAACCGTTTCATCATCTTAAACCGAAGTGAAATTTATTGGGAGAGTGAAGAGTATGGAATGTTGAATCTCAGAGCAAAGTTTGATCCATTAGATGATATCAGCTCAGAGGTTTACAATTTGTTGGTCAACTTGAAAACACAAACATCTGTACTGAACAATACGAGGTTGTTTCTTGATTCGACAGGTGTGATACAGTGGGTGAACAATTTGTTGGAAGGTGATTCGTCGGTTACATGGAAGCAGCCAAGAAGCAAATGTTTAAGATATAATGTTTGTGGAAATTTTTCTAGCTGTAATGATGATGATTATGACTCATGCAAATGTTTACCTGGATTCTACAATGGAGATTCTTCTCTACAAGACAAGCTACGTTGTGCGCGGATAAAATCACCGTCATGTACCGGAAATGACACGGTGTTTCTAAACTTGACAATGATTAAAACAGGAAGACCTGATAAAAAATTCAATGTGGAGACTGAAGAAAATTGCACATCTATATGCCTTGGGAGATGTCCCCAGTGTCAAGCTTACTCATATGCGCCACCCTCGACTGATCGCCAACGAAGTGATATTGCTTCAAACTGTTGGATCTGGACACATGATTTAACTACTCTTAAAGAAGACTATACCTATCCGCGGGATGATGGCCGTAGACTCTTTGTTTTAGTTGACAAATCAGATATAGAAGCAACTCCAAGAACTTGTGAGCCTTGTGGTACAAACACGGTCCCTTATCCGCTTAGTACCGGATCCAATTGTGGAGACCTCAAATACTTTAACTTTAGATGCAACACTTCGACAGGTCAACTTAACTTCACCACCAACAACAAAGTTAGTTACAAAGTTATTCGTGTAAAGCCTATTTCAAGAGCATTTACCATTCATAATGAGGATAATTCTTTTATTCAAAATTGTGGTGATGGATCTAACCGCACGGGAAATCTGAAGGTTTCTTCACCGTATCACATTGACAATTCGTGCTCTGACCAAGTGGAAGTTAGTTGGGAACCACCTTCCGAAGAACCTGTTTGTGATAACTCTGATGATTGTCATGGTTGGAGAAATTCTACCTGTAGTAAAGGAAGGTGTCTTTGCAATGCAAACTATCATTGGAGTGGCGAGTTTTTAAATTGTATCAAAAAACCTGCATCCTCTCCTAATGCTACAAAAGGAAACTCCAAAAGCACACTCTCTTTGATTCTTGGCTTAACTCTTCCTGGTATGGCTATTCTAGCCTGCATAATCACTTTTCCTTATGTATGCAGACGGAGAATAGCTCGGATGTTTAAGAAAGAAAACGAAAGCATACAAAGAAATATTAGAGGGGGCTATTATGACAGTGAAAGACATGTTAAGGACTTGATAGACAAGGAGGGATTGGAAGAGAATGACAATGAAGGAATAGAGGTTCCTTATTTCGATTTCGAGACCATAGTAATGGCTACAAATGACTTTTCAGATGCAAATAAGCTCGGAAGAGGCGGTTATGGGCCAGTATACAAGGGTAAGCTTCAAGGTGGTCAGGAAATTGCGGTAAAGAGGCTTTCCAGTGTTTCTTCACAAGGATTGCAAGAATTCAAGAATGAGGTTGTTTTGATTGCAAAACTTCAACATCGAAACCTTGTTAAATTACGGGGATATTGCGTAAAAGGAGAAGAAAAAATTCTACTCTACGAATATATGCCTAACAAGAGCTTAGACTTATTGATCTTCGATCCTACAAAGAGCATAATTTTGGATTGGCAAATGCGGTTGGATATTATTCTTGGAATTGCTCGTGGAATGCTCTATCTTCATCAAGACTCAAGATTGAGAGTTATTCATCGAGATCTGAAAACCAGCAACATTCTTCTAGATGAGGATATGCAGCCAAAAATATCAGATTTTGGTTTGGCCAGAATATTTGGAGGAAAAGAAACCGAGGCAAACACAGAGAGGGTTGTTGGGACATATGGATACATGTCTCCCGAATATGCATTGGATGGACAATTCTCTACAAAGTCAGATGTTTTCAGCTTTGGTGTAGTCTTGCTCGAGATCATAAGTGGGAAAAAGAACACGGGATTCTATCAAACAAAAGAAATTTCAAGTCTTTTGGGTTATGCTTGGACGCTATGGCGAGAGGAAAAGTTGCATGATTTACTCGACCAATCTCTCTGCGATACTTACAACGCTAACCAATTTATTCGGTGTTCACAAATTGGACTCTTATGCGTACAAGATGAACCAGGAGATCGACCAAACATGTCAAATATTGTAACAATGCTAGACAATGAAACTACAGCGCTCCCAACCCCTAATCAGCCAACTTTTTTTATGCGAAAAAACCTATCTAACACAGGTTCGTCAAGTCTGCAGCTTGAAAGTGGCATTCAAGAAGGCCGATAG 2928 0.3904 MCLAGDTLKVGQKIIDNENETNLVSAGKIFELGFFSAGEQRYLGIWYHIPEGSEQSQKQTVVWVANRDHPVAVDSTGVFQIAEDGNLVVVDTSSNNITYWSSNSTVKDSSNSSSQNRTLKLMDSGNLVLLDDRNLKLWQSFENPSDTFLLGMKMDTNLKLTSWKSADDPGSGNFTFKMEDNRFIILNRSEIYWESEEYGMLNLRAKFDPLDDISSEVYNLLVNLKTQTSVLNNTRLFLDSTGVIQWVNNLLEGDSSVTWKQPRSKCLRYNVCGNFSSCNDDDYDSCKCLPGFYNGDSSLQDKLRCARIKSPSCTGNDTVFLNLTMIKTGRPDKKFNVETEENCTSICLGRCPQCQAYSYAPPSTDRQRSDIASNCWIWTHDLTTLKEDYTYPRDDGRRLFVLVDKSDIEATPRTCEPCGTNTVPYPLSTGSNCGDLKYFNFRCNTSTGQLNFTTNNKVSYKVIRVKPISRAFTIHNEDNSFIQNCGDGSNRTGNLKVSSPYHIDNSCSDQVEVSWEPPSEEPVCDNSDDCHGWRNSTCSKGRCLCNANYHWSGEFLNCIKKPASSPNATKGNSKSTLSLILGLTLPGMAILACIITFPYVCRRRIARMFKKENESIQRNIRGGYYDSERHVKDLIDKEGLEENDNEGIEVPYFDFETIVMATNDFSDANKLGRGGYGPVYKGKLQGGQEIAVKRLSSVSSQGLQEFKNEVVLIAKLQHRNLVKLRGYCVKGEEKILLYEYMPNKSLDLLIFDPTKSIILDWQMRLDIILGIARGMLYLHQDSRLRVIHRDLKTSNILLDEDMQPKISDFGLARIFGGKETEANTERVVGTYGYMSPEYALDGQFSTKSDVFSFGVVLLEIISGKKNTGFYQTKEISSLLGYAWTLWREEKLHDLLDQSLCDTYNANQFIRCSQIGLLCVQDEPGDRPNMSNIVTMLDNETTALPTPNQPTFFMRKNLSNTGSSSLQLESGIQEGR 975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g01284 975 Gene3D Phosphorylase Kinase; domain 1 629 740 - -
Trre8g01284 975 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 741 944 - -
Trre8g01284 975 ProSiteProfiles PAN/Apple domain profile. 313 404 IPR003609 -
Trre8g01284 975 MobiDBLite consensus disorder prediction 956 975 - -
Trre8g01284 975 Pfam Protein tyrosine and serine/threonine kinase 669 936 IPR001245 GO:0004672|GO:0006468
Trre8g01284 975 Pfam PAN-like domain 313 383 IPR003609 -
Trre8g01284 975 Pfam S-locus glycoprotein domain 230 293 IPR000858 GO:0048544
Trre8g01284 975 ProSiteProfiles Protein kinase domain profile. 665 951 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g01284 975 SMART serkin_6 665 909 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g01284 975 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 110 958 - -
Trre8g01284 975 SUPERFAMILY Protein kinase-like (PK-like) 647 954 IPR011009 -
Trre8g01284 975 Gene3D Transferase(Phosphotransferase) domain 1 741 947 - -
Trre8g01284 975 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 630 740 - -
Trre8g01284 975 ProSitePatterns Serine/Threonine protein kinases active-site signature. 786 798 IPR008271 GO:0004672|GO:0006468
Trre8g01284 975 CDD STKc_IRAK 671 938 - -
Trre8g01284 975 SUPERFAMILY alpha-D-mannose-specific plant lectins 61 169 IPR036426 -
Trre8g01284 975 Pfam D-mannose binding lectin 60 159 IPR001480 -
Trre8g01284 975 ProSiteProfiles Bulb-type lectin domain profile. 1 142 IPR001480 -
Trre8g01284 975 Gene3D - 2 142 IPR036426 -
Trre8g01284 975 CDD B_lectin 15 144 IPR001480 -
Trre8g01284 975 SMART blect_4 13 144 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g01284 Trre-Chr8 9498851 9502611 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g01284 620 954 Receptor kinase-like Gene Family AT4G23150 56.119 1.26e-125 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre8g01284 PK_Tyr_Ser-Thr 4.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g01284 - - tpra:123882048 1624.37