Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g01277 ATGGGAACTGTTTTTCTCTTCTTCAAACTGTGTACTTCCTGGTTGTTAATATGCTCTTCTCAGCTGTGTTTAGCACGAGATACTTTGAAGGCAGACCAGATGATAATAGATAATGGATATGATGCCAATCTTGTTTCAGCTGGAAAAATATTTGAACTTGGCTTCTTTACTCCAAGCAAGATCCCAGGTGATTCACAAAGATACTTAGGAATATGGTATTATCAAATACAAGACAGGTCAGAACAATCTCAAAAACAAACTGTTGTGTGGGTTGCAAACAGAGACTACCCTGTATCTGGTGGTAATTCAACTGGTGTTTTCCAAATAGCAAAAGATGGAAATCTTGTAGTTGTTGACACATCCGGTAATAATATAACATACTGGTCAACCAATTTCTCTTCTAATTCTTCGCCGAAAAATAGGACATTGAAACTCATGGATTCTGGTAATCTTGTGTTACTAGATGATAGGAATTTGAAACTCTGGCAGAGCTTTGAAAATCCATCTGACACATTCCTACCAGGTATGAAGATGGATACGAGTTTGATATTGACCAGTTGGAAAAGTGTTGACGACCCAGGAACTGGGAATTTCACTTTTAAGATGGAGGACAACAGTTTCATTATCTTAAACCGAAGCAAAAAAATTTGGGAGAGCAAAGAGTACGGAATGTTGAATTTCAATGCAAAATTTGATCAATTAGATGATATCAGCTATGAGGTTTACAATTTGTTGACCAACTTCAGTTTATTCATTAGGAACAACAATACAGTTCCTATGAAATACTACGACAATACGAGAATGTTTCTTGATTCTACAACAGGCGTGATTCAGTGGGTCGACAATTCTGTTGAAGGTGACTCGTCAGTTAGGTGGAAGCAGCCAAAAACCAATTGTTTAAAATATAATGTTTGTGGAGACTTTGCTAGCTGTAATGTCCATGATAAATGTAAATGCTTACCTGGATTCGTTGACGCGGGAAAAGGAGATTCTTCTCTGCAAAACAAGATAGGTTGTATAAGGAAAACATCAATATCATGTACTCGAAATGATACCTGGGCCTTCTTGAACTTGACCATGATTAAAACACGAAGGCCGGATATAAAGGTTGCGGTAGACCATGAAGAAAATTGCGCATCTAGATGCCGTGAGATGTGTCCACCGTGCCAGGCTTACTCATATGCTCCACTCCTTGCTCAGCGTACTCTTAATTCTTTAACATGTTGGATCTGGATTCACAGTTTAACTACTCTTAAAGAAGGCTACACTGCTGGGGATGATGATCGTAGACTCTTTGTCCTAGTTGATAAATCAGACATAGAAGCAACTCCGAGAACTTGTGAGCCTTGTGGTACAAACATAGTCCCTTATCCTCTTAGTACTGGATCCAACTGTGGAGATCTCAAATACTTCAACTTTAGATGCAACACTTCAACGGGTCAACTTAGCTTCATCACGACCACCAACGTTAGTTACGGAGTTCTTCGTGTACAGCCAAGTGCAAGAACATTTACCATATATTATGACGAAGAACCGAACTTTTGTGAGGAAGGACCGAACCACACAGGAAATCTGAATATTTCTTCACCCTATAGCATTACCAGTAACAATTTGTGCTCTGATCATGTGGAAGTTAGTTGGGAACCACCTTCCGAACCCGTTTGTGATAACTTTGGTGATTGCCATGGTTGGGAACATTCTACCTGTAGTAAAACAAACAAGTGTCTCTGTAATGCAAACTATGAATGGAATGGCGAGCATTTAAGTTGTATCGAGAAACGTAGATCTAAAAGCTCATTCTATTGGATTCTTGGTTTAACTCTTACTGGTGTGGTTGCTCTAGCATGCATCATTATTTTCGGTTATGCATGCAGGCGAAGAATAGCTCGTATGTTTAAGCAAGATAAGGAAAACATACAAAGAAATGTTAGAGGGCAATTCTACGACAGTGAAAGACATGTGAAGAACTTGATAGACATGGAGGGATTGGAAGAGAATGATAATGAAGGAATAGAGGTTCCTTATTTCGATTTTGAGAGCATACTAATCGCCACAGATGACTTTTCAGATGCAAATAAACTCGGAAAAGGTGGCTTTGGGCCAGTTTACAAGGGTAAACTTGGTGGTCAAGAAATTGCGGTAAAGAGACTTTCAAGTGTTTCGTCACAAGGCTTACAGGAATTTAAGAATGAGGTTGTTTTGATTGCTAAACTTCAACATCGAAACCTTGTTAAATTACGGGGCTACTGCATAAAAGGGGAGGAAAAAATTCTGATTTATGAATATTTGCCTAACAAGAGTTTGGACTTATTGATATTTGATCCAACAAAATGCGTAATTTTGGATTGGCATATGCGGTTTGATATAATTCTCGGAATTGCTCGTGGACTGCTCTATCTTCATCAAGATTCAAGACTTAGAGTTATTCACCGAGATTTGAAAACTAGCAACATTCTTCTAGACGAGGAGATGCAACCAAAAATCTCGGATTTTGGACTAGCAAGAATATTTGGAGGTAAAGAAGTAGAGGCAAGCACAGAGAGGATTGTCGGTACATACGGATACATGTCTCCTGAATATGCATTGGATGGATATTTCTCAACAAAGTCAGATGTATTCAGTTTTGGCGTTGTCTTACTTGAAATCATTAGTGGAAAAAGAAACACCGGATTCTTCCGGTCAAAAGAAATTTCAAGCCTTTTGGGTTATGCTTGGAGACTATGGAGAGAGGAGAAATTGCAAGATTTAATGGACCCATCTCTATCCGATTCATACAATGTCAACCAATTTATTAGGTGTGCACAAATTGCACTCCTATGCGTGCAAGATGAACCTGATGATCGTCCAAACATGTCAAATGTGGTGACTATGTTAGACAATGAAACCACAGCCCTCTTAACCCCTAAACAACCAACCTTTTTTTCACGTAAAGACATGTCTAGTACAGCTTCTTCAAGTCTACAGATTGAGAGTAGCATTCAAGAAGGTCGATAG 2994 0.3888 MGTVFLFFKLCTSWLLICSSQLCLARDTLKADQMIIDNGYDANLVSAGKIFELGFFTPSKIPGDSQRYLGIWYYQIQDRSEQSQKQTVVWVANRDYPVSGGNSTGVFQIAKDGNLVVVDTSGNNITYWSTNFSSNSSPKNRTLKLMDSGNLVLLDDRNLKLWQSFENPSDTFLPGMKMDTSLILTSWKSVDDPGTGNFTFKMEDNSFIILNRSKKIWESKEYGMLNFNAKFDQLDDISYEVYNLLTNFSLFIRNNNTVPMKYYDNTRMFLDSTTGVIQWVDNSVEGDSSVRWKQPKTNCLKYNVCGDFASCNVHDKCKCLPGFVDAGKGDSSLQNKIGCIRKTSISCTRNDTWAFLNLTMIKTRRPDIKVAVDHEENCASRCREMCPPCQAYSYAPLLAQRTLNSLTCWIWIHSLTTLKEGYTAGDDDRRLFVLVDKSDIEATPRTCEPCGTNIVPYPLSTGSNCGDLKYFNFRCNTSTGQLSFITTTNVSYGVLRVQPSARTFTIYYDEEPNFCEEGPNHTGNLNISSPYSITSNNLCSDHVEVSWEPPSEPVCDNFGDCHGWEHSTCSKTNKCLCNANYEWNGEHLSCIEKRRSKSSFYWILGLTLTGVVALACIIIFGYACRRRIARMFKQDKENIQRNVRGQFYDSERHVKNLIDMEGLEENDNEGIEVPYFDFESILIATDDFSDANKLGKGGFGPVYKGKLGGQEIAVKRLSSVSSQGLQEFKNEVVLIAKLQHRNLVKLRGYCIKGEEKILIYEYLPNKSLDLLIFDPTKCVILDWHMRFDIILGIARGLLYLHQDSRLRVIHRDLKTSNILLDEEMQPKISDFGLARIFGGKEVEASTERIVGTYGYMSPEYALDGYFSTKSDVFSFGVVLLEIISGKRNTGFFRSKEISSLLGYAWRLWREEKLQDLMDPSLSDSYNVNQFIRCAQIALLCVQDEPDDRPNMSNVVTMLDNETTALLTPKQPTFFSRKDMSSTASSSLQIESSIQEGR 997
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g01277 997 SUPERFAMILY Protein kinase-like (PK-like) 670 984 IPR011009 -
Trre8g01277 997 SMART blect_4 37 168 IPR001480 -
Trre8g01277 997 SMART serkin_6 688 958 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g01277 997 Pfam D-mannose binding lectin 87 181 IPR001480 -
Trre8g01277 997 Pfam Protein tyrosine and serine/threonine kinase 692 958 IPR001245 GO:0004672|GO:0006468
Trre8g01277 997 SUPERFAMILY alpha-D-mannose-specific plant lectins 88 192 IPR036426 -
Trre8g01277 997 Pfam S-locus glycoprotein domain 230 324 IPR000858 GO:0048544
Trre8g01277 997 Gene3D Transferase(Phosphotransferase) domain 1 763 970 - -
Trre8g01277 997 Pfam PAN-like domain 353 416 IPR003609 -
Trre8g01277 997 Gene3D Phosphorylase Kinase; domain 1 651 762 - -
Trre8g01277 997 Gene3D - 22 166 IPR036426 -
Trre8g01277 997 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 653 762 - -
Trre8g01277 997 ProSiteProfiles Protein kinase domain profile. 688 973 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g01277 997 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 763 966 - -
Trre8g01277 997 MobiDBLite consensus disorder prediction 975 997 - -
Trre8g01277 997 CDD B_lectin 44 168 IPR001480 -
Trre8g01277 997 ProSitePatterns Serine/Threonine protein kinases active-site signature. 808 820 IPR008271 GO:0004672|GO:0006468
Trre8g01277 997 ProSiteProfiles PAN/Apple domain profile. 347 436 IPR003609 -
Trre8g01277 997 CDD STKc_IRAK 694 960 - -
Trre8g01277 997 ProSiteProfiles Bulb-type lectin domain profile. 36 166 IPR001480 -
Trre8g01277 997 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 127 980 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g01277 Trre-Chr8 9475963 9480098 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g01277 676 996 Receptor kinase-like Gene Family AT4G11530 56.535 9.56e-122 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre8g01277 PK_Tyr_Ser-Thr 1.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g01277 - - tpra:123882048 1447.18