Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g01274 ATGAGAGCTATTTCTCTCTTCTTCAACCTATACTTAGGTATATGGTATCACATACAAGAAGGGTCAGAACAACCTCAAAAACAAACAGTTGTGTGGGTTGCAAACAGAGACAAACCTATAGCTGTTGATTCAACTGGAGTTTTTCAAATAGCTGAAGATGGAAATCTTGTGATTGTAGACACAAACATATCTGGTAGGAATATTACATACTGGTCATCCAATTCCAATGTCATCAAACACTCTTCTAATTCTTCGCCGAAAAACAGAACAGTGAAGCTTATGGATTCTGGTAACCTAGTGTTACTAGATGATGAACAGAAGGAAGTAAAACTCTGGCAGAGTTTGGAAAATCCATCTGATACATTCCTACCAGGAATGAAGATGAATAGGAATTTGAAACTGTCAAGTTGGAAAAATTCTGATGATCCAGGAAGTGGAAATTTCACATTTAAGATGGAACAAATTAGTGGGCTCAATCGTTTTAAGATCTTAAACTTAGATGAAATTTATTGGGAGAGTGAAGAGTATGGATCTTTGACTTATGATTCAAAGATTGATCAATCTGATGATATCAGCTCAGTGGTTTATAATCTGTTGACAAATTTCAGCTTACCTATACTGCGCAAACTAATACCTATGAACAGTTATGACAATACAAGGTTGTTTCTTGATTCTAAAGGTGTGATTCAGTGGGTGGATAATTTGTTGGTAGGTGGTGGTGATTTGTTCGTTAGGTCAAGGTGGAATCAGCCAAAAACCAAATGTTTAAGATATGATTTTTGTGGAAACTTTGCGAGCTGTAACGATGATGATTTTGAGTCATGCAAATGTTTAGCTGGATTCTACGATGATTATTCAGGAGACGGAGATTCTTCTCCACAAGACAAGCTACGTTGTGCGCGGAGAAAATCACCATCATGTACCGGAAATGACACGGTGTTTCTAAACTTGACAAAGATTAAAACAGGAAGACCTGATCAAAAATTCAATGTGGAATATGAAGAAGATTGTAAATCTATATGCCTTGCGAGATGTCCACAGTGCCAAGCTTACTCATATGCTCCACCCTCGACTGATCGCCAGCGTAGTGGTCCTATTCTATCAAACTGTTGGATCTGGAATAACAGTTTAACTACTCTTAAAGAAAACTACACTTACGGGGATGATAGTCGCAGAATCTTTGTTTTAGTTGACAAATCAGATATAGAAGCAACTCCAAGAACTTGTGAGCCTTGTGGTACAAACATGGTCCCTTATCCACTTAGTACCGGAACCAATTGTGGAGACCTCAAATACTTTAACTTTGGATGCAACACTTCGACGGGTCAACTTAACTTCACCACCAGCAACAAACTTAGTTACAAAGTTATTCGTGTAAAGCCTATTTCAAGAACATTTACCTTTCATAATGAGGATAGTTCTCTTAATCGAAATTGTGGTGATGGATCTAACCGCACGGGAAATCTTAAGGTTTTTTCACCGTTTCACAGTGATAATTCATGCAACGAAAGAGTGGAAGTTAGTTGGGAACCACCATCCGAGGAACCTGTTTGTGATAACTCTGTTGATTGCCATGGTTGGAGAAATTCTACTTGTAGTAAAGGAAATAGGTGTCTTTGCAATGCAAACTATCGTTGGAGTGGCGAGATTTTAAGTTGTACCGAAAGTTTTTTAGAACCTACATCATCTCCTAATGCTACAAAAGATTCAACAAAAGGAAACTCCAAAAGCTCATTAGCTTTGATTCTTGGCTTAACTATTGGACTGGTTATTTTAGCTTGCATAATTATTTTTGCTTATGTATGCAGACGGAGAATAGCTCCTATCGTTAAAAAAGAGAATGAACACATACAGAGAAATATTAGAGGGGGCTTTTATGACAGTGAAAGACATGTGAAGGACTTAATAGACATGGAGGGATTGGAAGAGAATGACAATGAAGGAATCGAGGTTCCTTATTTCGATTTCGAGAGCATAGTAATGGCCACAAATGACTTTTCAGATGAAAATAAGCTTGGAAGAGGTGGTTATGGGCCAGTGTACAAGGGTAAGCTTCAAGGTGGTCAAGAAATTGCGGTAAAGAGGCTTTCGAGTGTTTCTTCTCAAGGATTACAAGAATTCAAGAATGAGGTTGTTTTGATTGCAAAACTTCAGCATCGAAACCTTGTAAAATTACGGGGCTACTGCATAAAAGGGGAAGAAAAAATTTTAATTTATGAGTATTTGCCTAACAAAAGTTTGGACTTATTGATATTTGATCCAACAAAATGCGTAATTTTGGATTGGCAAATGCGGTTTGATATAATTCTTGGAATTGCCCGTGGAATGCTCTATCTTCATCAAGATTCAAGACTTAGAGTTATTCACCGAGATTTGAAAACTAGCAACATTCTTCTAGACGAGGAGATGCAACCAAAAATCTTGGATTTTGGACTAGCAAGAATATTTGGTGGTAAAGAAGTAGAGGCAAGCACAGAGAGGATTGTCGGTACATACGGGTACATGTCTCCTGAATATGCATTGGATGGATATTTCTCAACAAAGTCAGATGTTTTCAGTTTTGGCGTTGTCTTGCTTGAAATCATCAGTGGAAAAAGAAACACCGGATTCTTCCGGTCAAAAGAAATTTCAAGCCTTTTGGGTTATGCTTGGAGACTATGGAGAGAGGAGAAATTGCAAGATTTAATGGACCCATCTCTATCCGATTCATACAATGTCAACCAATTTATTAGGTGTGCACAAATTGCACTCCTATGCGTGCAAGATGAACCTGATGATCGTCCAAACATGTCAAATGTGGTGACTATGTTAGACAATGAAACCACAGCCCTCTTAACCCCTAAACAACCAACCTTTTTTTCACGTAAAGACATGTCTAGTACAGCTTCTTCAAGTCTACAGATTGAGAGTAGCATTCAAGAAGGTCGATAG 2931 0.3801 MRAISLFFNLYLGIWYHIQEGSEQPQKQTVVWVANRDKPIAVDSTGVFQIAEDGNLVIVDTNISGRNITYWSSNSNVIKHSSNSSPKNRTVKLMDSGNLVLLDDEQKEVKLWQSLENPSDTFLPGMKMNRNLKLSSWKNSDDPGSGNFTFKMEQISGLNRFKILNLDEIYWESEEYGSLTYDSKIDQSDDISSVVYNLLTNFSLPILRKLIPMNSYDNTRLFLDSKGVIQWVDNLLVGGGDLFVRSRWNQPKTKCLRYDFCGNFASCNDDDFESCKCLAGFYDDYSGDGDSSPQDKLRCARRKSPSCTGNDTVFLNLTKIKTGRPDQKFNVEYEEDCKSICLARCPQCQAYSYAPPSTDRQRSGPILSNCWIWNNSLTTLKENYTYGDDSRRIFVLVDKSDIEATPRTCEPCGTNMVPYPLSTGTNCGDLKYFNFGCNTSTGQLNFTTSNKLSYKVIRVKPISRTFTFHNEDSSLNRNCGDGSNRTGNLKVFSPFHSDNSCNERVEVSWEPPSEEPVCDNSVDCHGWRNSTCSKGNRCLCNANYRWSGEILSCTESFLEPTSSPNATKDSTKGNSKSSLALILGLTIGLVILACIIIFAYVCRRRIAPIVKKENEHIQRNIRGGFYDSERHVKDLIDMEGLEENDNEGIEVPYFDFESIVMATNDFSDENKLGRGGYGPVYKGKLQGGQEIAVKRLSSVSSQGLQEFKNEVVLIAKLQHRNLVKLRGYCIKGEEKILIYEYLPNKSLDLLIFDPTKCVILDWQMRFDIILGIARGMLYLHQDSRLRVIHRDLKTSNILLDEEMQPKILDFGLARIFGGKEVEASTERIVGTYGYMSPEYALDGYFSTKSDVFSFGVVLLEIISGKRNTGFFRSKEISSLLGYAWRLWREEKLQDLMDPSLSDSYNVNQFIRCAQIALLCVQDEPDDRPNMSNVVTMLDNETTALLTPKQPTFFSRKDMSSTASSSLQIESSIQEGR 976
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g01274 976 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 631 741 - -
Trre8g01274 976 ProSiteProfiles PAN/Apple domain profile. 307 398 IPR003609 -
Trre8g01274 976 Pfam D-mannose binding lectin 29 133 IPR001480 -
Trre8g01274 976 Pfam S-locus glycoprotein domain 214 282 IPR000858 GO:0048544
Trre8g01274 976 SMART blect_4 5 118 IPR001480 -
Trre8g01274 976 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 742 945 - -
Trre8g01274 976 Pfam Protein tyrosine and serine/threonine kinase 669 937 IPR001245 GO:0004672|GO:0006468
Trre8g01274 976 SUPERFAMILY Protein kinase-like (PK-like) 648 963 IPR011009 -
Trre8g01274 976 Gene3D - 8 117 IPR036426 -
Trre8g01274 976 ProSitePatterns Serine/Threonine protein kinases active-site signature. 787 799 IPR008271 GO:0004672|GO:0006468
Trre8g01274 976 CDD STKc_IRAK 672 939 - -
Trre8g01274 976 MobiDBLite consensus disorder prediction 954 976 - -
Trre8g01274 976 ProSiteProfiles Protein kinase domain profile. 666 952 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g01274 976 Gene3D Phosphorylase Kinase; domain 1 632 741 - -
Trre8g01274 976 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 92 959 - -
Trre8g01274 976 Gene3D Transferase(Phosphotransferase) domain 1 742 949 - -
Trre8g01274 976 CDD B_lectin 9 118 IPR001480 -
Trre8g01274 976 SUPERFAMILY alpha-D-mannose-specific plant lectins 30 143 IPR036426 -
Trre8g01274 976 ProSiteProfiles Bulb-type lectin domain profile. 1 114 IPR001480 -
Trre8g01274 976 SMART serkin_6 666 937 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g01274 Trre-Chr8 9464042 9468089 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g01274 654 975 Receptor kinase-like Gene Family AT4G11530 56.231 2.51e-122 386
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre8g01274 PK_Tyr_Ser-Thr 8.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g01274 - - tpra:123882048 1664.82