Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g01236 ATGGATTGGAAGAGATCTATTTTGAAGATCCATGGACATGTTATTCTATTCGGATTTTTGTTTATTTCTATAATTCAGATTTCAACTGCTGTTACTGATCCTACTGATGTTGCTGCACTTAATAGCTTATATGCTTCATTGGGATCTCCTCTTCTACCTGGGTGGGTTGCTAGTGGTGGAGATCCGTGCGGAGAAGGGTGGCAAGGCATTCAATGTAATGGTTCGTTTATACAGAAAATTGTTCTAAACGGTGCAAATTTGGGAGGAGAGCTGGGTGATAAACTTGCAACATTTGTTTCAATCTCAGTAATTGATCTGAGTAACAACAACATTGGAGGAAGTATTCCATCAAATTTGCCAGCTACAATGAGAAACTTTTTTCTTTCAGCCAACCTGTTTACTGGAAGTATTCCAGTCTCTTTATCCGCTTTAACCGGACTGAGTGACATGTCTCTTAACAACAATCATTTAACCGGAGAAATACCAGATGCATTTTTGTCACTTACACAGTTGATCAATCTAGATTTATCGAGTAATAACTTGAGCGGGGAACTACCTCCTTCGATGGAGAACTTGTCATCTTTGACCACCTTGCGCTTGCAGGATAATCAACTATCTGGGACACTTGATGTTTTACAAGACCTTCCTCTGAAAGATTTGAATATCGAGAATAACCAATTTGCTGGCCCGATACCTCCGAAGTTGCTAAGCATTCCTAAATTCAGACAAGCTGGAAATCCATTTAATGATAATAATTCCACGTCAACTCGTGCTCCCGCACCTCGCTCCCCAGTGACAGCACCGCCAGGAGCACCACCAGGAGCACCGTTTTTTGTAGTACCATCTTCTGGTTCTGGCCCTGTACCTACCAAACAGGCTGATGGACCGACTGTAGCAACTGAGTCAAAGTCTGGGAAATCAAACAAACATACCAAAAAGGTGGTTTTGATATCTATCGGCAGTATTTTGGCATTCATTATTTTGGTACTAGCACTCGTTCTATTTATTCCAAGATGTGGTAGAAGAAGGGAACGAGTTGACCGAAGGTCCAGGCGACATCAAATTGGTGCATATGGAGATGAAAGACAACAACATCCTAGGGATTTAGGGGCTATAGTTCAACCACCAATTCAACCAGAAAAAGTACCGATACCGACACCGACACGGGATGTCTTGAGGCCACATACTGATCGCCAAGAAGAGCCTAGGAGAGTGTGGGCTGTTCCAAATGTACCGGATAAGCAAGAGAAGGATGTGCAAAGAATGATGACAATACCAAAGCCGGTTCATCATGAGATTGATATCAGTACACCAGAAGTGTATTCTGTGCCTCCTCCTCCGCCTCCACCACCACCTCCGCCACCCCCACCTCCACCCCCACCGCCACCTCCTCCTGTTCTTCCTACTAAGAGGATGATTGTTGAGCCAACAATTCCCCATAGAGGAACTAATGCCGGTCCATCCTTAAGAAGTTCAATTCCACTTCCTACTTTTGCAAAATCTTTCACCATCGCATCCCTTCAACAGTATACAAATAGCTTTTCTCAAGAAAATCTTATAGGAGGAGGCATGTTGGGCACTGTGTACAGGGCAGAGCTACCTGGTGGGAAGCTACTTGCTGTAAAGAAACTCGACAGAAGAGCCTCTGTTCACCAGAAGGATGAAGAGTTTCTTGAATTGGTAAATAGTATCGACAGAATACGACATACAAATATTGTTGAGCTCATTGGATACTGTTCAGAGCATGGTCAAAGGCTTCTGATCTATGAGTACTGCAGTAATGGGTCACTACATGATGCACTTCACACAGATGAAGAATACAAAGCAAAACTATCATGGAATGCTCGCATTCGGATGGCACTTGGGACAGCTAGAGCTTTAGAGTATTTGCATGAGCAATGTCAGCCGCCTGTGGTACACAGAAATTTGAAGTCTGCCAATGTTCTCCTTGATGATGATCTATCTGTGCGTGTATCTGATTGTGGTTTAGCTCCATTGATAGCTTCAGGGTCTGTAACTCAGCTCTCGGGGAACCTGCTATCAGCTTATGGTTATGGAGCTCCAGAATTTGAATCGGGAACTTACACTTACCAAAGCGATGTATACAGCGTTGGAGTAGTTATGTTAGAACTTTTGACCGGCCGTCAGTCCCATGACAGGACACGTCCACGAGGGGAACAATTTCTTGCTAGATGGGCAATTCCCAAACTTCACGATATTGATGCATTATCAAAGATGGTTGATCCTTCTTTAAATGGAGTTTACCCTGCAAAGTCATTGTCCAATTTTGCCGACATTATTGCTCGATGCCTTCAGCCGGAGCCCGAATTTAGGCCAGCAATGTCGGAAGTCGTCTTATACTTACTAAATATGATTAAGAGGGAGTCTCATAAAAGTGATTCAAATGAAAAATGA 2415 0.4335 MDWKRSILKIHGHVILFGFLFISIIQISTAVTDPTDVAALNSLYASLGSPLLPGWVASGGDPCGEGWQGIQCNGSFIQKIVLNGANLGGELGDKLATFVSISVIDLSNNNIGGSIPSNLPATMRNFFLSANLFTGSIPVSLSALTGLSDMSLNNNHLTGEIPDAFLSLTQLINLDLSSNNLSGELPPSMENLSSLTTLRLQDNQLSGTLDVLQDLPLKDLNIENNQFAGPIPPKLLSIPKFRQAGNPFNDNNSTSTRAPAPRSPVTAPPGAPPGAPFFVVPSSGSGPVPTKQADGPTVATESKSGKSNKHTKKVVLISIGSILAFIILVLALVLFIPRCGRRRERVDRRSRRHQIGAYGDERQQHPRDLGAIVQPPIQPEKVPIPTPTRDVLRPHTDRQEEPRRVWAVPNVPDKQEKDVQRMMTIPKPVHHEIDISTPEVYSVPPPPPPPPPPPPPPPPPPPPPPVLPTKRMIVEPTIPHRGTNAGPSLRSSIPLPTFAKSFTIASLQQYTNSFSQENLIGGGMLGTVYRAELPGGKLLAVKKLDRRASVHQKDEEFLELVNSIDRIRHTNIVELIGYCSEHGQRLLIYEYCSNGSLHDALHTDEEYKAKLSWNARIRMALGTARALEYLHEQCQPPVVHRNLKSANVLLDDDLSVRVSDCGLAPLIASGSVTQLSGNLLSAYGYGAPEFESGTYTYQSDVYSVGVVMLELLTGRQSHDRTRPRGEQFLARWAIPKLHDIDALSKMVDPSLNGVYPAKSLSNFADIIARCLQPEPEFRPAMSEVVLYLLNMIKRESHKSDSNEK 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g01236 804 MobiDBLite consensus disorder prediction 262 276 - -
Trre8g01236 804 MobiDBLite consensus disorder prediction 438 470 - -
Trre8g01236 804 Pfam Protein tyrosine and serine/threonine kinase 517 786 IPR001245 GO:0004672|GO:0006468
Trre8g01236 804 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 33 260 - -
Trre8g01236 804 Gene3D Transferase(Phosphotransferase) domain 1 592 804 - -
Trre8g01236 804 ProSiteProfiles Protein kinase domain profile. 514 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g01236 804 SUPERFAMILY L domain-like 32 239 - -
Trre8g01236 804 SUPERFAMILY Formin homology 2 domain (FH2 domain) 455 465 - -
Trre8g01236 804 MobiDBLite consensus disorder prediction 440 470 - -
Trre8g01236 804 MobiDBLite consensus disorder prediction 244 261 - -
Trre8g01236 804 MobiDBLite consensus disorder prediction 377 402 - -
Trre8g01236 804 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 481 591 - -
Trre8g01236 804 SUPERFAMILY Protein kinase-like (PK-like) 489 788 IPR011009 -
Trre8g01236 804 MobiDBLite consensus disorder prediction 285 304 - -
Trre8g01236 804 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 592 802 - -
Trre8g01236 804 Gene3D Ribonuclease Inhibitor 32 258 IPR032675 -
Trre8g01236 804 MobiDBLite consensus disorder prediction 242 309 - -
Trre8g01236 804 Pfam Leucine rich repeat 146 205 IPR001611 GO:0005515
Trre8g01236 804 Pfam Leucine rich repeat N-terminal domain 34 73 IPR013210 -
Trre8g01236 804 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 72 785 - -
Trre8g01236 804 Gene3D Phosphorylase Kinase; domain 1 488 591 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g01236 Trre-Chr8 9134504 9140141 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g01236 22 799 Strubbelig Receptor Gene Family AT4G03390 61.047 0.0 860
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Trre8g01236 PK_Tyr_Ser-Thr 2.6e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g01236 - - mtr:25492087 1268.83