Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g01189 ATGGCTTCTGGATCATCCGGTCGCGGCGGTAACCCCGGTTCCAAAGGCTTCGATTTTGCATCCGATGACATCCTATGCTCCTACGACGACTTTTCCAATAGGGATTCCAATTCCAATGGCAATCACACCGATTCAACCAAGGATTTTCACAAATCAAGGGTTGCAAGGACATCAGTTTTTCCTGCTACTGGCTATAATCCACCTGAGGATTCTGTAACTCAAGATGTGATTGCAACTGTTGATAAGAGTATGAAGAAATATACTGATAACCTATTGCGATTTCTCGAGGGAATTAGTTCAAGGCTATCACAGTTGGAATTATATTGCTATAATCTTGACAAATCTATTGGAGAAATTAGATCTGATTTAAGCCGTGATCACGGGGAACAAGATTCAAAGCTCAAATCTCTTGAAAAGCATGTTCAGGAAGTTCATAGGTCAGTACAAATTTTAAGAGACAAGCAAGAGTTAGCTGAGACTCAGAAAGAATTAGCTAAGCTTCAACTTGCTCAGAAAGAATCATCTTCCTCAAGCCATTCACAGTCCAATGAGGACAAATCTACACCCTCTAACACAGATCCTAAAAAAACTGATAATGCATCTGATGCAAACAACCATCAGTTAGCTCTCGCCCTGCCTCATCAAATTGCTCCTCAGCTGCAGCCTGCAGGACCCCCGCCCCAAGCTCAACCACCAAATGCGAATCAACCCACTCAACAACCTGCTTATTACATGCAGGCTGCCCCTACAGCGTCTCAGCTACCCCAGAATCAGTATATGCCTTCTGATCAACAATACCGAACCCCCCAACTACAACAAGACATGTCCCGGGTGGCTCAACAACCAACACCATCTCAAATAAACCCTCCCACACCTGTGCAACAATTTTCTCAGTACCAGCAGCAGCAGCAGCAGTGGCCTCAGCAGGTGCAACAATCCTCAGTGCAACCTCAAATGAGACCCCCCTCACCTACTGTGTATCCTCCATACCAACCAAACCAAACATCAAATCCATCATCACCCACAGAAACACTGCCAAACAGCATGCCCATGCAAATGCCATATTCAGGGGTTCCGCAACCAGGATCCAGCCGTGCTGATTCCATGCAATATGGATATGGTGGAACTGGTAGAACAGTTCCACAGCAACCTCCACCCCAGCAAATCAAGGGCTCATTCTCTTCACAACCTGGTGATGCGTATGGAGCTAGCGGAACCCACCCTCCTCCTGGTAATGCATACATGATGTATGATGGTGGTGAGGGAGGAAGGACACAGCATCCACCACCCCAACCCTCTCATTTTGCCCAATCTGGATATCCTCCGACAGGTGCTTCCCTTCAGAACCCCAATCCCATGTCCCGAAATCCTAGCCAGTCACAGTTTGGACGCAACCATCCTTACAATGAGTTGATTGAGAAATTGGTGAGCATGGGATTCAGGGGTGAGCACGTGGTGAACGTGATCCAAAGGATGGAGGAGAGTGGGCAGACCATAGATTTCAACTCTGTTCTTGACAGGTTGAGTGGGCATAGCTCTGTTGGTCCCCAGAGAGGGTGGTCAGGGTGA 1569 0.4729 MASGSSGRGGNPGSKGFDFASDDILCSYDDFSNRDSNSNGNHTDSTKDFHKSRVARTSVFPATGYNPPEDSVTQDVIATVDKSMKKYTDNLLRFLEGISSRLSQLELYCYNLDKSIGEIRSDLSRDHGEQDSKLKSLEKHVQEVHRSVQILRDKQELAETQKELAKLQLAQKESSSSSHSQSNEDKSTPSNTDPKKTDNASDANNHQLALALPHQIAPQLQPAGPPPQAQPPNANQPTQQPAYYMQAAPTASQLPQNQYMPSDQQYRTPQLQQDMSRVAQQPTPSQINPPTPVQQFSQYQQQQQQWPQQVQQSSVQPQMRPPSPTVYPPYQPNQTSNPSSPTETLPNSMPMQMPYSGVPQPGSSRADSMQYGYGGTGRTVPQQPPPQQIKGSFSSQPGDAYGASGTHPPPGNAYMMYDGGEGGRTQHPPPQPSHFAQSGYPPTGASLQNPNPMSRNPSQSQFGRNHPYNELIEKLVSMGFRGEHVVNVIQRMEESGQTIDFNSVLDRLSGHSSVGPQRGWSG 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g01189 522 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 3 522 - -
Trre8g01189 522 MobiDBLite consensus disorder prediction 321 335 - -
Trre8g01189 522 MobiDBLite consensus disorder prediction 218 239 - -
Trre8g01189 522 MobiDBLite consensus disorder prediction 255 465 - -
Trre8g01189 522 MobiDBLite consensus disorder prediction 336 401 - -
Trre8g01189 522 MobiDBLite consensus disorder prediction 255 320 - -
Trre8g01189 522 MobiDBLite consensus disorder prediction 167 201 - -
Trre8g01189 522 MobiDBLite consensus disorder prediction 219 234 - -
Trre8g01189 522 Coils Coil 134 170 - -
Trre8g01189 522 Pfam UBA-like domain (DUF1421) 468 512 IPR010820 -
Trre8g01189 522 MobiDBLite consensus disorder prediction 430 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g01189 Trre-Chr8 8750851 8756484 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g01189 57 195 Trihelix Transcription Factor Family AT5G14540 34.532 1.90e-22 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g01189 - - gmx:100782994 696.812