Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g01162 ATGGCTTCAAGTACCACAACAGATGCAACCACAACACCAGTTGATCAAGTTCCCTCAACTGACCAGCTCAGTGTACCTAGAAAGGAACTTCAACTTGTTGGCATAAGCTCAATGCTTATAGCATCCAGATATGAGGAGTTATTGTCACCAAAGGTTATATTCTTTTTATATGGTTTATTGAATGTAGAGTATGTGATTTCTGATATGATTTAG 213 0.3756 MASSTTTDATTTPVDQVPSTDQLSVPRKELQLVGISSMLIASRYEELLSPKVIFFLYGLLNVEYVISDMI 70
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g01162 70 Gene3D - 10 57 - -
Trre8g01162 70 MobiDBLite consensus disorder prediction 1 23 - -
Trre8g01162 70 Pfam Cyclin, N-terminal domain 23 57 IPR006671 -
Trre8g01162 70 SUPERFAMILY Cyclin-like 14 58 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g01162 Trre-Chr8 8509796 8510113 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g01162 24 57 Core Cell Cycle Gene Families AT3G11520 58.824 1.24e-08 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g01162 - - zab:102072889 50.447