Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g01144 ATGGATACTACAAAGGATCATCAAAATATTGTTACCTTAGACGTTCATGCTGCCAAAAATCTGTTAGATTTATCTGGTTACAATTATCTTGATGTGAGGTCAGTGGAGGAATTCAATAAAAGTCATGTTGAGAATGCTATTAATGTCCCCTATATGTTCAAAACTGAAGAAGGACGTGTGAAAAATCCAGATTTTGTTAAACAAGTAGAAGCAAGATGTAAGAGTGATGATCATTTAATTGTGGCTTGCAATTCTGGAGGAAGATCAAGTCGAGCCTGGGTTGATCTCAATGATTCTGGATTTAAAAATATTGTTAACATGGGAGGAGGCTACTCTGCATGGGTGGATGCTGGATTTGCAGGTGATGACAAGCCTGCAGAAGACCTCAAAACAGCTTGCAAGTTCCGTCCATAA 414 0.3841 MDTTKDHQNIVTLDVHAAKNLLDLSGYNYLDVRSVEEFNKSHVENAINVPYMFKTEEGRVKNPDFVKQVEARCKSDDHLIVACNSGGRSSRAWVDLNDSGFKNIVNMGGGYSAWVDAGFAGDDKPAEDLKTACKFRP 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g01144 137 Pfam Rhodanese-like domain 18 116 IPR001763 -
Trre8g01144 137 CDD RHOD 18 115 - -
Trre8g01144 137 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 9 119 IPR036873 -
Trre8g01144 137 Gene3D - 2 120 IPR036873 -
Trre8g01144 137 ProSiteProfiles Rhodanese domain profile. 23 123 IPR001763 -
Trre8g01144 137 PANTHER THIOSULFATE SULFURTRANSFERASE 18 4 122 IPR044684 GO:0003824
Trre8g01144 137 SMART rhod_4 13 120 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g01144 Trre-Chr8 8317609 8323413 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g01144 1 119 Sulfurtransferasese or Rhodanese AT5G66170 43.802 1.37e-33 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g01144 K22547 - gmx:100794624 230.72