Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g01132 ATGAGCAAAGCAATTAGTTCTTCTCTTCTTATATCTTTTCTCATTTTTTCATACTTTGTGATTGAAATCAATGGAAACAAACAAGTTAAAGCTCTTGACAATCTTCACAAAGAAAAATATAGAGTAAATTCACAAATTGATAAGAGTGAGTTTGAGGTACAAGATATTGTGTATGAAGAAGCTATTGTTCATTCTCAAGAAGGACTTAAAGAGAAAGATAGGATTAAGAGGCTACCAGGGCAACCCTTTGTGAAATTCTCACAATTTGGAGGGTATATCACATTGGATAAGTCTGCTGGTAGTGCTTTTTATTATTACTTTGTTGAAGCTCAACAATCTAAAGAAACACTTCCCCTTCTTCTTTGGCTCAATGGAGGTCCTGGATGTTCATCTTTGGCCTATGGAGCAATGCAAGAATTGGGACCTTTTAGAGTAAACAGTGACGGCAAAACACTACACCAAAATAGATATTCATGGAACTATGCTGCAAATGTTTTGTTCGTGGAGTCACCTGTTGGGGTAGGATTTTCCTATTCAAATAAATCATCAGATTATGATATTAATGGAGACAAGAGAACAGCAACACTTAACTATTTATTTTTAGTAAATTGGTTGGAAAGATTTCCAGAATATAAAAATAGAGATTTCTATATTTCTGGAGAAAGTTATGCTGGACATTATGTTCCTCAACTTGCACATACCATACTCTATCATAACAAAAAGGCAAAGACAATCATTAACCTCAAAGGAATCTTGATAGGGAATGCAGTAATCAATGATGACACAGACTCACCAGGAATGTATGATTTTCTTGCAAGTCATGCTATCATCTCAGATAAAGCAGCTTATGATATCAACAAAAATATTTGTGATTTCTCATCATCAAATAATCTCACAGATGAATGCAATGCAGTTGCTGATGAAGTTAGTATGGATCTTGCATTCATTGATTTATATAACATTTATGCCCCAGTATGCAAAAATGGAAATATCACATCCAAGCCCAAAAGATACACTATTGTCAATGATCCATGTGGTGAGTTTTATGTGTATGCTTATCTTAATAGACAAGATGTTCAAGAAGCACTTCATGCTAATGTCACCAAACTCAAATATGAATGGAGTCCTTGCAGTAGTGTTATTAGACACTGGGTTGATAGTGCTTCAACAGTCCTTCCCCTTTTACATGAATTTCTCAATAATGGCCTAAGAGTTTGGATTTTCAGTGGTGATACAGATGGAAGGGTTCCTGTTACTTCAACTAAGTATTCAATTAAGAAGATGAACCTTCCTGTTAAAAAGATTTGGCACCCTTGGCTTGCCTATGGAGAGGTTGGGGGCTATACAGAAGTATACAAGGGAGACCTAACATTTGCTACAGTGAGAGAAGCAGGACATCAAGTGCCAAGTTACCAACCAGCAAGAGCTCTTACTTTGATTAAACATTTCTTAGATGGCACTCCTCTTCCTGCTCCTAAATTAAAAAACTAG 1491 0.3575 MSKAISSSLLISFLIFSYFVIEINGNKQVKALDNLHKEKYRVNSQIDKSEFEVQDIVYEEAIVHSQEGLKEKDRIKRLPGQPFVKFSQFGGYITLDKSAGSAFYYYFVEAQQSKETLPLLLWLNGGPGCSSLAYGAMQELGPFRVNSDGKTLHQNRYSWNYAANVLFVESPVGVGFSYSNKSSDYDINGDKRTATLNYLFLVNWLERFPEYKNRDFYISGESYAGHYVPQLAHTILYHNKKAKTIINLKGILIGNAVINDDTDSPGMYDFLASHAIISDKAAYDINKNICDFSSSNNLTDECNAVADEVSMDLAFIDLYNIYAPVCKNGNITSKPKRYTIVNDPCGEFYVYAYLNRQDVQEALHANVTKLKYEWSPCSSVIRHWVDSASTVLPLLHEFLNNGLRVWIFSGDTDGRVPVTSTKYSIKKMNLPVKKIWHPWLAYGEVGGYTEVYKGDLTFATVREAGHQVPSYQPARALTLIKHFLDGTPLPAPKLKN 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g01132 496 FunFam Carboxypeptidase 69 328 - -
Trre8g01132 496 Pfam Serine carboxypeptidase 80 486 IPR001563 GO:0004185|GO:0006508
Trre8g01132 496 Gene3D alpha/beta hydrolase 69 328 IPR029058 -
Trre8g01132 496 ProSitePatterns Serine carboxypeptidases, serine active site. 218 225 IPR018202 GO:0004185
Trre8g01132 496 Gene3D - 391 486 - -
Trre8g01132 496 Gene3D - 345 381 - -
Trre8g01132 496 FunFam Carboxypeptidase 391 486 - -
Trre8g01132 496 SUPERFAMILY alpha/beta-Hydrolases 75 490 IPR029058 -
Trre8g01132 496 PRINTS Carboxypeptidase C serine protease (S10) family signature 155 167 IPR001563 GO:0004185|GO:0006508
Trre8g01132 496 PRINTS Carboxypeptidase C serine protease (S10) family signature 204 229 IPR001563 GO:0004185|GO:0006508
Trre8g01132 496 PRINTS Carboxypeptidase C serine protease (S10) family signature 456 469 IPR001563 GO:0004185|GO:0006508
Trre8g01132 496 PRINTS Carboxypeptidase C serine protease (S10) family signature 168 178 IPR001563 GO:0004185|GO:0006508
Trre8g01132 496 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 74 473 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g01132 Trre-Chr8 8189140 8194809 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g01132 353 489 Calmodulin-binding Proteins AT2G22960 32.117 9.12e-19 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g01132 K16297 - gmx:100783864 768.844